DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and AT3G27120

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001319654.1 Gene:AT3G27120 / 822331 AraportID:AT3G27120 Length:680 Species:Arabidopsis thaliana


Alignment Length:417 Identity:128/417 - (30%)
Similarity:203/417 - (48%) Gaps:49/417 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VGAKIKVEMGGGKAHEKTPAKELPKK--PPTTDASLANWHIGVGAATQAL-----SNEQPLQIKK 152
            |.||||:||   ...:|..:.|.|..  .|.:|.:...  .|.|:.:..|     ||..|     
plant   278 VSAKIKLEM---DVRQKRGSTESPSSCLSPQSDKNALG--RGYGSRSGGLRRGYRSNFVP----- 332

  Fly   153 METATESNGQDNACEIEHVHLGG--DDVLFSS----LEW----------------QSLAELVKTS 195
             ...|..|...|...    .:||  ||.|..|    ||.                ..|.|.|...
plant   333 -PVKTNGNNVGNLTS----RIGGKTDDALDDSTRTCLEMLCGPDGELPEKLRNLEPRLIEHVSNE 392

  Fly   196 ILQENIKIKWSDVCGNQRAIELIKEAVLTPIEFPQLFAHGLKPWRSLLLHGPPGSGKTLLAKALY 260
            |:..:..::|.|:.|.:.|.:.:.|.|:.|:..|.:|.....|.:.|||.||||:|||::.||:.
plant   393 IMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGKGLLLFGPPGTGKTMIGKAIA 457

  Fly   261 SETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKRDRATDHESS 325
            .|  .:.|||.|:||.:.|||.||.||::|.||.:|:.|.|:|||.|||:||.|:|....:||||
plant   458 GE--AKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESS 520

  Fly   326 KRFKNELLQLLDGMEHSLNGVFVLASTNLPWDIDEAFLRRFEKKLLVQLPNAAERSCLINRLLGS 390
            :|.|.:.|..::|.:.....:.::.:||.|.::|||..||..|:|.:.||::..|:.:|..||..
plant   521 RRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKK 585

  Fly   391 S--ISLNPRLLEQLVEISDHFTGDEIRLACKEISMHRVRCATKIGDRSIGLLAKESPAAIEANVE 453
            .  .:|:...:..:..:::.::|.:::...|:.:|..:|.|.|.|.....|...:.......:.:
plant   586 DGLFTLSDDDMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRGIDITNLTKDDMRLVTLQDFK 650

  Fly   454 KAFRQVRP-LGQKLLAKHEQWQQENGS 479
            .|.::||| :.|..|..:|.|..:.||
plant   651 DALQEVRPSVSQNELGIYENWNNQFGS 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 68/163 (42%)
AT3G27120NP_001319654.1 P-loop containing Nucleoside Triphosphate Hydrolases 382..567 CDD:476819 74/186 (40%)
AAA_lid_3 593..>628 CDD:465537 5/34 (15%)
Vps4_C <644..676 CDD:462762 8/31 (26%)
Blue background indicates that the domain is not in the aligned region.

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