DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and FIGNL1

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_071399.2 Gene:FIGNL1 / 63979 HGNCID:13286 Length:674 Species:Homo sapiens


Alignment Length:428 Identity:141/428 - (32%)
Similarity:204/428 - (47%) Gaps:69/428 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 ILKKVGAKIKVEMGGGKAHEKTPAKELPKKPPTTDASLANWHIGVGAATQALSNEQPLQIKKMET 155
            ||.|  |..|.|..|.|.....|..:..|:....|.. ..:|     ..|..|......:||...
Human   273 ILNK--ACSKTEDNGPKEDSSLPTFKTAKEQLWVDQQ-KKYH-----QPQRASGSSYGGVKKSLG 329

  Fly   156 ATESNG-----------QDNACEIEHVHLGGD---------------------DVLFSSLEWQSL 188
            |:.|.|           ||          ||:                     |....:|| ..:
Human   330 ASRSRGILGKFVPPIPKQD----------GGEQNGGMQCKPYGAGPTEPAHPVDERLKNLE-PKM 383

  Fly   189 AELVKTSILQENIKIKWSDVCGNQRAIELIKEAVLTPIEFPQLFAHGLK-PWRSLLLHGPPGSGK 252
            .||:...|:.....:.|.|:.|.:.|...|||.|:.|:..|.:|. ||: |.:.:||.||||:||
Human   384 IELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFT-GLRGPPKGILLFGPPGTGK 447

  Fly   253 TLLAKALYSETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKRD 317
            ||:.|.:.|  |...|||:|:||.:.|||.||.||::|.||.:|..:.|:|||.|||:||.|:|.
Human   448 TLIGKCIAS--QSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRG 510

  Fly   318 RATDHESSKRFKNELLQLLDG-MEHSLNGVFVLASTNLPWDIDEAFLRRFEKKLLVQLPNA-AER 380
            .. :||||:|.|.|.|..||| ...|.:.:.|:.:||.|.:||||..||..|:|.:.||.| |.:
Human   511 DG-EHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARK 574

  Fly   381 SCLINRLLGSSISLNPRLLEQLVEISDHFTGDEIRLACKEISMHRVRCATKIGDRSIGLLAKESP 445
            ..:||.:......|:...:||:|:.||.|:|.::...|:|.|:..:| :.:..|     :|..:|
Human   575 QIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIR-SLQTAD-----IATITP 633

  Fly   446 AAIE----ANVEKAFRQVRP-LGQKLLAKHEQWQQENG 478
            ..:.    .:.|.|||.||| :..|.|..:|.|.:..|
Human   634 DQVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFG 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 77/165 (47%)
FIGNL1NP_071399.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..179
Necessary and sufficient for interaction with RAD51. /evidence=ECO:0000305|PubMed:23754376 295..344 10/54 (19%)
RecA-like_Figl-1 380..565 CDD:410933 83/189 (44%)
AAA_lid_3 590..>621 CDD:465537 10/30 (33%)
Vps4_C <631..671 CDD:462762 12/39 (31%)
Blue background indicates that the domain is not in the aligned region.

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