DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and Rpt2

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster


Alignment Length:407 Identity:106/407 - (26%)
Similarity:176/407 - (43%) Gaps:93/407 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 KKVGAKIKVEMGGGKAHEKTP--AKELPKKPPTTDASLANWHIGVGAATQALSNEQPLQIKKMET 155
            ||....|...:|..|...|.|  |.:||:..|.|...|           :.|..|:......||.
  Fly    22 KKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRL-----------KLLKLERIKDYLMMED 75

  Fly   156 ATESN-----GQDNACEIEHVHLGGDDVLFSSLEWQSLAE-------LVKTSILQE--------- 199
            ....|     .||...|.|...:  ||:..:.:...:|.|       :|.||:..|         
  Fly    76 EFIRNQERLKPQDEKNEEERSKV--DDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFV 138

  Fly   200 -------------NIKI--------------------------KWSDVCGNQRAIELIKEAVLTP 225
                         |.|:                          .::|:.|....|:.|||:|..|
  Fly   139 DKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELP 203

  Fly   226 IEFPQLFAH-GLKPWRSLLLHGPPGSGKTLLAKALYSETQGQVTFFNITASIMVSKWRGESEKIL 289
            :..|:.:.. |:||.:.::|:||||:||||||||:.::|  ..||..:..|.::.|:.|:..|::
  Fly   204 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT--SATFLRVVGSELIQKYLGDGPKLV 266

  Fly   290 RVLFHMAAKRAPSVIFFDEIESLTSKR--DRATDHESSKRFKNELLQLLDGMEHSLNGVFVLAST 352
            |.||.:|.:.|||::|.|||:::.:||  ..:......:|...|||..|||.: |...|.|:.:|
  Fly   267 RELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD-SRGDVKVIMAT 330

  Fly   353 NLPWDIDEAFLR--RFEKKLLVQLPNAAERSCLI----NRL-LGSSISLNPRLLEQLVEISDHFT 410
            |....:|.|.:|  |.::|:...||:...:..:.    :|: |...::|:     :|:...|..:
  Fly   331 NRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLS-----ELIMAKDDLS 390

  Fly   411 GDEIRLACKEISMHRVR 427
            |.:|:..|.|..:..:|
  Fly   391 GADIKAICTEAGLMALR 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 61/168 (36%)
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 106/407 (26%)
Blue background indicates that the domain is not in the aligned region.

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