DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10793 and CG4701

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_609721.1 Gene:CG4701 / 34858 FlyBaseID:FBgn0028868 Length:384 Species:Drosophila melanogaster


Alignment Length:237 Identity:84/237 - (35%)
Similarity:138/237 - (58%) Gaps:10/237 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 ILQENIKIKWSDVCGNQRAIELIKEAVLTPIEFPQLFAHGLKPWRS---LLLHGPPGSGKTLLAK 257
            :..|:|.|.|||:.|....|:.::|.|:.|:...:||:.. |.||:   :|||||||.||||:||
  Fly    85 VTPEDIDISWSDIAGLDGTIQELRETVVLPVRHRKLFSRS-KLWRAPKGVLLHGPPGCGKTLIAK 148

  Fly   258 ALYSETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKRDRATDH 322
            |:..:  ..:.|.|:...::..||.|||:|:...:|.:|.|..|.:||.|||||....|. :.||
  Fly   149 AIAKD--AGMRFINLDVGVLTDKWYGESQKLATAVFTLAKKLQPCIIFIDEIESFLRMRG-SNDH 210

  Fly   323 ESSKRFKNELLQLLDGMEHSLN-GVFVLASTNLPWDIDEAFLRRFEKKLLVQLPNAAERSCLINR 386
            |::...|.:.:...||:..:.| .|.||.:||.|.|:|:|.|||...:..:.:|...:|..::..
  Fly   211 EATAMIKTQFMLQWDGLMSNTNICVLVLGATNRPQDLDKAILRRMPAQFHIGVPRDCQRREILQL 275

  Fly   387 LLGSSISLNPRL-LEQLVEISDHFTGDEIRLACKEISMHRVR 427
            :|.:. .|:|.: |::|..::..|:|.::|..|:..||:|:|
  Fly   276 ILQTE-QLSPSVNLKELARLTIGFSGSDLRELCRHASMYRMR 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 63/167 (38%)
CG4701NP_609721.1 CDC48 <21..368 CDD:273521 84/237 (35%)
RecA-like_ATAD1 96..261 CDD:410928 64/168 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.