DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and psmc1a

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_956327.1 Gene:psmc1a / 336786 ZFINID:ZDB-GENE-030131-8730 Length:440 Species:Danio rerio


Alignment Length:228 Identity:71/228 - (31%)
Similarity:124/228 - (54%) Gaps:8/228 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 WSDVCGNQRAIELIKEAVLTPIEFPQLFAH-GLKPWRSLLLHGPPGSGKTLLAKALYSETQGQVT 268
            ::|:.|....|:.|||:|..|:..|:.:.. |:||.:.::|:|.||:||||||||:.::|  ..|
Zfish   184 YADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT--SAT 246

  Fly   269 FFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKR--DRATDHESSKRFKNE 331
            |..:..|.::.|:.|:..|::|.||.:|.:.|||::|.|||:::.:||  ..:......:|...|
Zfish   247 FLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 311

  Fly   332 LLQLLDGMEHSLNGVFVLASTNLPWDIDEAFLR--RFEKKLLVQLPNAAERSCLINRLLGSSISL 394
            ||..|||.: |...|.|:.:||....:|.|.:|  |.::|:...||:...:..:...........
Zfish   312 LLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVA 375

  Fly   395 NPRLLEQLVEISDHFTGDEIRLACKEISMHRVR 427
            :...|:.|:...|..:|.:|:..|.|..:..:|
Zfish   376 DDVTLDDLILAKDDLSGADIKAICTEAGLMALR 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 60/168 (36%)
psmc1aNP_956327.1 PTZ00361 25..440 CDD:185575 71/228 (31%)
Blue background indicates that the domain is not in the aligned region.

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