DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and Psmc2

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_150239.2 Gene:Psmc2 / 25581 RGDID:3428 Length:433 Species:Rattus norvegicus


Alignment Length:378 Identity:111/378 - (29%)
Similarity:179/378 - (47%) Gaps:48/378 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 YPKILKKVGAKIKVEMGGGKAHEKTPAKELPKKPPTTDASLAN---WHIGVGAATQALSNEQPLQ 149
            |.:.:|:|...|:..:  .|.:|.|..||       :|..||.   |.:  .|..|.|.:|||||
  Rat    41 YSRQIKQVEDDIQQLL--KKINELTGIKE-------SDTGLAPPALWDL--AADKQTLQSEQPLQ 94

  Fly   150 IKKMETATESNGQDNACEIEHVHLG------GDDVLFSSLE-----------WQ-------SLAE 190
            :.:......::.:|....|......      .|.|..:.:|           :|       .:..
  Rat    95 VARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 159

  Fly   191 LVKTSILQENIKIKWSDVCGNQRAIELIKEAVLTPIEFPQLFAH-GLKPWRSLLLHGPPGSGKTL 254
            .|....::|...:.:|||.|.:..||.::|.|.||:..|:.|.: |::|.:.:||.||||:||||
  Rat   160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224

  Fly   255 LAKALYSETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKR--D 317
            .|:|:.:.|  ...|..:..|.:|.|:.||..:::|.||.||..:...:||||||:::...|  |
  Rat   225 CARAVANRT--DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287

  Fly   318 RATDHESSKRFKNELLQLLDGMEHSLNGVFVLASTNLPWDIDEAFLR--RFEKKLLVQLPNAAER 380
            .|......:|...||:..|||.:...| :.||.:||.|..:|.|.:|  |.::|:...||:...|
  Rat   288 GAGGDNEVQRTMLELINQLDGFDPRGN-IKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351

  Fly   381 SCLINRLLGSSISLNPRL-LEQLVEISDHFTGDEIRLACKEISMHRVRCATKI 432
            :.:. ::...|:|:...: .|.|..:..:.||.|||..|.|..|..:|...||
  Rat   352 THIF-KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 62/168 (37%)
Psmc2NP_150239.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
PRK03992 44..430 CDD:179699 110/375 (29%)
Blue background indicates that the domain is not in the aligned region.

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