DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and rpt-2

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_504558.1 Gene:rpt-2 / 178988 WormBaseID:WBGene00004502 Length:443 Species:Caenorhabditis elegans


Alignment Length:247 Identity:79/247 - (31%)
Similarity:137/247 - (55%) Gaps:18/247 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 LVKTSILQENIKIKWSDVCGNQRAIELIKEAVLTPIEFPQLFAH-GLKPWRSLLLHGPPGSGKTL 254
            :|....|::..:..::||.|..:.|:.|||||..|:..|:.:.. |::|.:.::|:|.||:||||
 Worm   173 MVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTL 237

  Fly   255 LAKALYSETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKR--D 317
            ||||:.::|  ..||..|..|.::.|:.|:..|::|.||.:|.:.|||::|.|||:::.:||  .
 Worm   238 LAKAVANQT--SATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDS 300

  Fly   318 RATDHESSKRFKNELLQLLDGMEHSLNGVFVLASTNLPWDIDEAFLR--RFEKKLLVQLPNAAER 380
            .:......:|...|||..|||.: |...|.||.:||....:|.|.:|  |.::|:...||:...:
 Worm   301 NSGGEREIQRTMLELLNQLDGFD-SRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTK 364

  Fly   381 SCLI----NRL-LGSSISLNPRLLEQLVEISDHFTGDEIRLACKEISMHRVR 427
            ..:.    :|: ||..::     ||:.:...|..:|.:|:..|.|..:..:|
 Worm   365 RRIFQIHTSRMTLGKEVN-----LEEFITAKDELSGADIKAMCTEAGLLALR 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 63/168 (38%)
rpt-2NP_504558.1 PTZ00361 1..443 CDD:185575 79/247 (32%)
Blue background indicates that the domain is not in the aligned region.

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