DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and Gykl1

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_034423.2 Gene:Gykl1 / 14625 MGIID:891990 Length:549 Species:Mus musculus


Alignment Length:152 Identity:30/152 - (19%)
Similarity:50/152 - (32%) Gaps:65/152 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 HEKTPAKELPKKPPTTDASLANWHIGVGAATQALSNEQPLQIKK-----METATESNGQDNACEI 168
            |:...|:|.||:         .|           ..:.|..|.:     :|.|.|..|| .:.:|
Mouse    39 HQVEIAQEFPKE---------GW-----------VEQDPKAILQSVYECIEKACEKLGQ-QSIDI 82

  Fly   169 EHVHLGG---------------DDVLFSSLEW-----QSLAELVKTSILQEN------------- 200
            .::...|               .:.|::::.|     ||..|.:..||...|             
Mouse    83 SNIKAIGVTNQRETTIVWDKFTGEPLYNAVVWLDLRTQSTVENLSKSISVSNNFVKNKTGLPIST 147

  Fly   201 ----IKIKW--SDVCGNQRAIE 216
                :|:.|  .:|...|:|||
Mouse   148 YFSAVKLHWLIENVRKVQKAIE 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 5/9 (56%)
Gykl1NP_034423.2 ASKHA_NBD_FGGY_GK1-3-like 11..510 CDD:466802 30/152 (20%)
Blue background indicates that the domain is not in the aligned region.

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