DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and Vps4

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_310453.2 Gene:Vps4 / 1271692 VectorBaseID:AGAMI1_008294 Length:441 Species:Anopheles gambiae


Alignment Length:345 Identity:119/345 - (34%)
Similarity:175/345 - (50%) Gaps:53/345 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 IKVEMGGGKAHEKTPAK---------------ELPKKPPTTDASLANWHIGVGAATQALSNEQPL 148
            ||.|..|.||.:...||               :..||.|..|        |.|||..        
Mosquito    44 IKYEAQGDKAKDSIRAKCFQYLDRAEKLKEYLKKGKKKPVKD--------GDGAAKD-------- 92

  Fly   149 QIKKMETATESNGQDNACEIEHVHLGGDDVLFSSLEWQSLAELVKTSILQENIKIKWSDVCGNQR 213
                    .:|.|.|::      ....||.     |.:.|...::.:|:.|...:|||||.|.:.
Mosquito    93 --------DKSKGNDSS------DSDSDDP-----EKKKLQAKLEGAIVVEKPHVKWSDVAGLEG 138

  Fly   214 AIELIKEAVLTPIEFPQLFAHGLKPWRSLLLHGPPGSGKTLLAKALYSETQGQVTFFNITASIMV 278
            |...:||||:.||:||.||.....||:.:||.||||:||:.||||:.:|.... |||::::|.:|
Mosquito   139 AKTALKEAVILPIKFPHLFTGKRMPWKGILLFGPPGTGKSYLAKAVATEANNS-TFFSVSSSDLV 202

  Fly   279 SKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKRDRATDHESSKRFKNELLQLLDGMEHSL 343
            |||.|||||:::.||.:|....||::|.||::||.|.|. ..:.||::|.|.|.|..:.|:....
Mosquito   203 SKWLGESEKLVKNLFELARAHKPSIVFIDEVDSLCSARS-DNESESARRIKTEFLVQMQGVGSDN 266

  Fly   344 NGVFVLASTNLPWDIDEAFLRRFEKKLLVQLPNAAERSCLINRLLGSSI-SLNPRLLEQLVEISD 407
            :||.||.:||.||.:|.|..|||||::.:.||:...|..:....||::. :|....|..|...:|
Mosquito   267 DGVLVLGATNTPWILDSAIRRRFEKRIYIPLPDEHARLVMFKIHLGNTAHTLTEDNLRTLASKTD 331

  Fly   408 HFTGDEIRLACKEISMHRVR 427
            .|:|.:|.:..::..|..||
Mosquito   332 GFSGSDISIVVRDALMQPVR 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 75/163 (46%)
Vps4XP_310453.2 MIT_VPS4 5..69 CDD:239141 8/24 (33%)
RecA-like_VPS4 125..295 CDD:410929 79/171 (46%)
AAA_lid_3 322..361 CDD:465537 9/30 (30%)
Vps4_C 378..438 CDD:462762
Blue background indicates that the domain is not in the aligned region.

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