DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and vps4a

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_002943933.1 Gene:vps4a / 100158600 XenbaseID:XB-GENE-970546 Length:436 Species:Xenopus tropicalis


Alignment Length:333 Identity:112/333 - (33%)
Similarity:186/333 - (55%) Gaps:33/333 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 IKVEMGGGKAHEKTPAK---ELPKKPPTTDASLANWHIGVGAATQALSNEQPLQIKKMETATESN 160
            ||.|....||.|...||   .|.:.....|.          ..|:...|::|::..:.|..::|:
 Frog    43 IKYEAHSDKAKESIRAKCMQYLDRAEKLKDY----------LKTKDKQNKKPVKESQNEKGSDSD 97

  Fly   161 GQDNACEIEHVHLGGDDVLFSSLEWQSLAELVKTSILQENIKIKWSDVCGNQRAIELIKEAVLTP 225
            .:            |::.     |.:.|.|.:..:|:.|...::|:||.|.:.|.|.:||||:.|
 Frog    98 SE------------GENP-----EKKKLQEQLMGAIVMEKPNVRWNDVAGLEGAKEALKEAVILP 145

  Fly   226 IEFPQLFAHGLKPWRSLLLHGPPGSGKTLLAKALYSETQGQVTFFNITASIMVSKWRGESEKILR 290
            |:||.||.....|||.:||.||||:||:.||||:.:|.... |||::::|.::|||.|||||:::
 Frog   146 IKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNS-TFFSVSSSDLMSKWLGESEKLVK 209

  Fly   291 VLFHMAAKRAPSVIFFDEIESLTSKRDRATDHESSKRFKNELLQLLDGMEHSLNGVFVLASTNLP 355
            .||.:|.:..||:||.||::||...|:. .:.|:::|.|.|.|..:.|:.::.:|:.||.:||:|
 Frog   210 NLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGILVLGATNIP 273

  Fly   356 WDIDEAFLRRFEKKLLVQLPNAAERSCLINRLLGSS-ISLNPRLLEQLVEISDHFTGDEIRLACK 419
            |.:|.|..|||||::.:.||..|.|:.:....||:: .||....:.:|.:.:|.::|.:|.:..:
 Frog   274 WVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGNTPHSLGEENIRELAKKTDGYSGADISIIVR 338

  Fly   420 EISMHRVR 427
            :..|..||
 Frog   339 DALMQPVR 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 74/163 (45%)
vps4aXP_002943933.1 PTZ00454 4..347 CDD:240423 112/333 (34%)
RecA-like_VPS4 120..290 CDD:410929 76/171 (44%)
Vps4_C 373..433 CDD:462762
Blue background indicates that the domain is not in the aligned region.

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