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Protein Alignment Sgs4 and LOC689840
DIOPT Version :9
Sequence 1: | NP_476717.4 |
Gene: | Sgs4 / 31304 |
FlyBaseID: | FBgn0003374 |
Length: | 287 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001041444.1 |
Gene: | LOC689840 / 689840 |
RGDID: | 1587540 |
Length: | 323 |
Species: | Rattus norvegicus |
Alignment Length: | 143 |
Identity: | 28/143 - (19%) |
Similarity: | 68/143 - (47%) |
Gaps: | 0/143 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 SGSTCCKTEPPRCETEPPRCETEPPRCETEPPRCETTPPTCKTEPPTCKTEPPTCRTEPPTCKTE 83
|.:...:.:|...:|:|...:.:|...:|:|...:..|...:|:|...:.:|...:|:|...:.:
Rat 86 SSNRAVQIDPKAVQTDPRAVQIDPKAVQTDPRAVQIDPKAVQTDPRAVQIDPKAGQTDPRAVQID 150
Fly 84 PPTCRTEPATCKTEPPTCRTEPPTCKTEPPTCRTEPPTCRTEPPTCKTEPPTCRTEPPTCKAEPP 148
|...:|:|...:.:|...:.:|...:.:|...:.:|...:.:|...:|:|...:.:|...:.:|.
Rat 151 PKAVQTDPRAVQIDPKAVQRDPRAVQIDPKAVQRDPRAVQIDPKAGQTDPRAVQIDPKAVQTDPR 215
Fly 149 TCRTEPPTCKTEP 161
..:.:|...:|:|
Rat 216 AVQIDPKAVQTDP 228
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Sgs4 | NP_476717.4 |
PTZ00436 |
<18..158 |
CDD:185616 |
26/138 (19%) |
LOC689840 | NP_001041444.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto97214 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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