DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgs4 and pqn-54

DIOPT Version :10

Sequence 1:NP_476717.4 Gene:Sgs4 / 31304 FlyBaseID:FBgn0003374 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_503423.1 Gene:pqn-54 / 187728 WormBaseID:WBGene00004139 Length:388 Species:Caenorhabditis elegans


Alignment Length:383 Identity:59/383 - (15%)
Similarity:119/383 - (31%) Gaps:109/383 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLELLVVLLVGLAALAPSGST--------CCKTEPPRCETEPPRCETEPPRCETEPPRCETTPP 57
            ||...|.:.... .||..||:.        |.:.:..:|..:..: :|:...|::.|.:.::...
 Worm     1 MRFTSLAIAFFA-CALVVSGNVLREKRQCGCAQPQQSQCSCQQVQ-QTQSCSCQSAPVQQQSPSC 63

  Fly    58 TCKTEPPTCKTEPPTCRTEPPTCKTEPPTCRTEPATCKTEPPTCRTEPPTCKTE------PPTCR 116
            :|.....|...:..|.:..|...::....|:..|:..:.: |.|:.:   |:::      ||...
 Worm    64 SCAQPQQTQNVQVQTTQCAPACQQSCTQQCQAAPSVAQCQ-PQCQQQ---CQSQCAPMYNPPATT 124

  Fly   117 TEPPTCRTEPPTCKTEPPTC-RTEPPTCKAEPPTCR------TEPPTCKTEPPSEKHCTKRIKRH 174
            |..|..:.:|...:....|| :.:.|..:.: |.|:      .:.|...|:.|...|....|::.
 Worm   125 TPAPVVQCQPMCQQQCQSTCVQQQQPASQCQ-PQCQQQCNVACDAPATSTQAPQVVHIQLEIQQA 188

  Fly   175 RTK-RTKRSKSTKKIVHHHNRPGTTPESGCG--CG----------------------------SK 208
            :.: :.:..:..:.......:|.....|.|.  |.                            :.
 Worm   189 QAQCQPQCQQQCQSSCTQQQQPANQCNSACNSQCSNICQQTAQATQQVYNQNSNTNTQMYNPYNN 253

  Fly   209 NESGGGGSGCILKDLLTPKCPDSKSKSQASCKPAP------------------------------ 243
            |..|.|.:.|      .|.|..:...|..|..|||                              
 Worm   254 NNQGSGSANC------APACQPACDNSCTSQTPAPMYNPYDASTSAPASSQAVIQIVLQSSVAQS 312

  Fly   244 -------------KCKSDPKPKAASKATSKPK-PKACDSGKKNTTKKPRKTQPQKGGC 287
                         :|....:|.|..::..:.. ..:|.:.:..||...:..|..:..|
 Worm   313 SQCTPQCEQSCQQQCVQQQQPAAQCQSACQDSCSSSCQAAQPATTACQQSPQSPQNSC 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sgs4NP_476717.4 PTZ00436 <18..158 CDD:185616 27/160 (17%)
pqn-54NP_503423.1 None

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