DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3939 and Nxnl2

DIOPT Version :9

Sequence 1:NP_001284837.1 Gene:CG3939 / 31295 FlyBaseID:FBgn0040396 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001163900.1 Gene:Nxnl2 / 689232 RGDID:1594820 Length:156 Species:Rattus norvegicus


Alignment Length:92 Identity:18/92 - (19%)
Similarity:34/92 - (36%) Gaps:15/92 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QRSPIYIYFYGEKDKDGRSWCPDCVAAEETIMSAFRNHAPADCMILVVDVGSRE----------S 77
            |...:.:||...:....|.:.|........::|..|..||.:.:.:..|..:.|          |
  Rat    25 QNKVVALYFAAGRCAPSRDFTPLLCDFYTELVSEARRPAPFEVVFVSADRSAEEMLDFMRELHGS 89

  Fly    78 WIGK--DNMFR---KPPYSVEGIPTLI 99
            |:..  .:.:|   |..|.:..||.::
  Rat    90 WLALPFHDPYRHELKKRYDITVIPKVV 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3939NP_001284837.1 DUF953 6..124 CDD:283713 18/92 (20%)
Nxnl2NP_001163900.1 TryX_like_family 10..144 CDD:239262 18/92 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1624076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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