DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3939 and nxnl1

DIOPT Version :9

Sequence 1:NP_001284837.1 Gene:CG3939 / 31295 FlyBaseID:FBgn0040396 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001104230.1 Gene:nxnl1 / 567911 ZFINID:ZDB-GENE-070424-115 Length:215 Species:Danio rerio


Alignment Length:71 Identity:17/71 - (23%)
Similarity:26/71 - (36%) Gaps:26/71 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 DCMILVVDVGSRESWIGKDNMFRKPPYSVEGIPTLIRW-KGVERLDGDQLLKSSLLELFFEE--- 124
            ||.:|..:..|....:|.| .||             .| :|.|.:|.:.::...     |:|   
Zfish   129 DCSVLSPNAVSEICTLGTD-CFR-------------NWQEGAELIDRNFMMNEE-----FDEGKM 174

  Fly   125 ---TDP 127
               |||
Zfish   175 RSMTDP 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3939NP_001284837.1 DUF953 6..124 CDD:283713 13/60 (22%)
nxnl1NP_001104230.1 Thioredoxin_like 8..153 CDD:294274 8/37 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..215
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1624076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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