DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3939 and cl

DIOPT Version :10

Sequence 1:NP_570048.1 Gene:CG3939 / 31295 FlyBaseID:FBgn0040396 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_608930.1 Gene:cl / 43938 FlyBaseID:FBgn0000318 Length:126 Species:Drosophila melanogaster


Alignment Length:120 Identity:47/120 - (39%)
Similarity:69/120 - (57%) Gaps:2/120 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RGFKEMENLIKLYENQRSPIYIYFYGEKDKDGRSWCPDCVAAEETIMSAFRNHAPADCMILVVDV 72
            :|:.|....::..||...|:::.|.|.||:.|.||||.||.||..|..|.:. ||.:...:.|||
  Fly     8 KGYDEFTKKMEELENGDEPVHVLFSGGKDEKGESWCPYCVKAEPVIHDALKK-APGNSHFVHVDV 71

  Fly    73 GSRESWIGKDNMFRKPPYS-VEGIPTLIRWKGVERLDGDQLLKSSLLELFFEETD 126
            |.|..|...:..|||.|.: :..:|||:|||..:||||::.....|:|:.||:.|
  Fly    72 GERAYWKDLNCPFRKDPNTHLIFLPTLLRWKRPQRLDGERCSNQDLVEMMFEDED 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3939NP_570048.1 DUF953 6..124 CDD:399247 45/116 (39%)
clNP_608930.1 DUF953 6..124 CDD:399247 45/116 (39%)

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