DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3939 and txdc-17

DIOPT Version :10

Sequence 1:NP_570048.1 Gene:CG3939 / 31295 FlyBaseID:FBgn0040396 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_497626.1 Gene:txdc-17 / 175400 WormBaseID:WBGene00022188 Length:132 Species:Caenorhabditis elegans


Alignment Length:130 Identity:41/130 - (31%)
Similarity:63/130 - (48%) Gaps:8/130 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EYVPARGFKEMENLIK-LYENQRSPIYIYFYGEKD-KDGRSWCPDCVAAEETIMSAFRNHAPA-- 63
            ::..|:|::..:..:| :.:.:|  :...|.|.|. ..|.|||||||.||..:....::.|.|  
 Worm     5 KHYTAQGYEAFQETLKSIGKGKR--VVALFTGSKILTTGESWCPDCVVAEPVVEEVIKDAAVAGL 67

  Fly    64 DCMILVVDVGSRESWIGKDNMFR-KPPYSVEGIPTLIR-WKGVERLDGDQLLKSSLLELFFEETD 126
            |...:.|.||:||.|......|| .|...:..||||:. ....:||...|:....|::.||.|.|
 Worm    68 DVHFVTVFVGNREVWRDPAVGFRTDPTLKLTCIPTLLEVGNKAKRLLERQIANKHLVKDFFTEED 132

  Fly   127  126
             Worm   133  132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3939NP_570048.1 DUF953 6..124 CDD:399247 39/123 (32%)
txdc-17NP_497626.1 DUF953 8..130 CDD:399247 39/123 (32%)

Return to query results.
Submit another query.