Sequence 1: | NP_001245510.1 | Gene: | N / 31293 | FlyBaseID: | FBgn0004647 | Length: | 2703 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_775960.4 | Gene: | CRB2 / 286204 | HGNCID: | 18688 | Length: | 1285 | Species: | Homo sapiens |
Alignment Length: | 1298 | Identity: | 320/1298 - (24%) |
---|---|---|---|
Similarity: | 442/1298 - (34%) | Gaps: | 461/1298 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 412 ACTSNPCHADAICDTSPINGSYAC------SCATGYKGVDCSEDIDECDQGSPCEHNGICV---N 467
Fly 468 TPGSYRCNCSQGFTGPRCETNINECESHPCQNEGSCLDDPGTFRCVCMPGFTGTQCEIDIDECQS 532
Fly 533 NPCLNDGTCHDKINGFKCSCALGFTGARCQINIDDCQSQPCRNRGICHDSIAGYSCECP-PGYTG 596
Fly 597 TSCEININDCDSNPC-HRGKCIDDVNSFKCLCDPGYTGYICQKQINECESNPCQFDGHCQDR--- 657
Fly 658 ------------------VGSYYCQCQAGTSGKNCEVNVNECHSNPCNNGATCIDGINSYKCQCV 704
Fly 705 PGFTGQHCEKNVDECISSPCANNGVCIDQVNGYKCECPRGFYDAHCLSDVDECASNPCVNEGRC- 768
Fly 769 ---EDGINEFICHCPPGYTGKRC------------------------------------------ 788
Fly 789 ------------------------------------------------------ELDI--DECSS 797
Fly 798 NPCQHGGT----------------------------CYDKLNAFSCQCMPGYTGQK----CETNI 830
Fly 831 DDCVTNPCGNGGTCIDKVNGYKCVCKVPFTGRDCESKMD---------PCASNRCKNEAKCTPSS 886
Fly 887 N---------------FLDFSCTCKLGYT---------------------GRY------------ 903
Fly 904 --------------------------------CDED--IDECSL---SSPCRNGASCLNVPGSYR 931
Fly 932 CLCTKGYEGRDCAINTDDCASFPCQNGGTCLDGIGDYSCLCVDGFDGKHCETDINECLSQPCQNG 996
Fly 997 ATCSQYVNSYTCTC--------PLGFSGINC-------------QTNDEDC----TESSCLNG-- 1034
Fly 1035 -----GSCIDGINGYNCSCLAGYSGA-----------NCQYKLNKCDSNPC---------LNGAT 1074
Fly 1075 CH-------------EQNNEYTCHCPSGFTGKQCSEYVDWCGQSPC-----ENGATCSQMKHQFS 1121
Fly 1122 CKCSAGWTGKLCDVQTISCQDAADRKGLSLRQLCNNGTCKDYGNSHVCYCSQGYAGSYCQKEIDE 1186
Fly 1187 CQSQPCQNGGTCRDLIGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRV-MNFSCSCPPG 1250
Fly 1251 TMGIICEI---NKDDCKPGACHNNGSCIDRVGGFECVCQPGFVGARCEGDINECLSNPCSNAGTL 1312
Fly 1313 DCVQLVNNYHCNCRPGHMGRHCEHKVDFCAQSPCQNGGNCNIRQSGHHCICNNGFYGKNCELS 1375 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
N | NP_001245510.1 | EGF_CA | 179..214 | CDD:238011 | |
EGF_CA | 217..252 | CDD:238011 | |||
EGF_CA | 260..291 | CDD:238011 | |||
EGF_CA | 295..329 | CDD:238011 | |||
EGF_CA | 331..369 | CDD:238011 | |||
EGF_CA | 449..486 | CDD:238011 | 14/39 (36%) | ||
EGF_CA | 488..524 | CDD:238011 | 11/35 (31%) | ||
EGF_CA | 526..562 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 564..600 | CDD:238011 | 18/36 (50%) | ||
EGF_CA | 602..637 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 640..675 | CDD:238011 | 13/55 (24%) | ||
EGF_CA | 677..713 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 715..750 | CDD:238011 | 16/34 (47%) | ||
EGF_CA | 753..789 | CDD:238011 | 13/135 (10%) | ||
EGF_CA | 791..827 | CDD:238011 | 6/69 (9%) | ||
EGF_CA | 829..865 | CDD:238011 | 11/35 (31%) | ||
EGF_CA | 907..943 | CDD:238011 | 9/40 (23%) | ||
EGF_CA | 946..982 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 984..1020 | CDD:238011 | 13/56 (23%) | ||
EGF_CA | 1027..1058 | CDD:238011 | 9/48 (19%) | ||
EGF_CA | 1062..1095 | CDD:238011 | 7/54 (13%) | ||
EGF_CA | 1184..1219 | CDD:238011 | 13/34 (38%) | ||
EGF_CA | 1221..1257 | CDD:238011 | 14/36 (39%) | ||
EGF_CA | 1259..1295 | CDD:238011 | 6/35 (17%) | ||
EGF_CA | 1297..1335 | CDD:238011 | 6/37 (16%) | ||
EGF_CA | 1417..1450 | CDD:238011 | |||
NL | 1476..1512 | CDD:197463 | |||
Notch | 1519..1553 | CDD:278494 | |||
Notch | 1565..1593 | CDD:278494 | |||
NOD | 1599..1648 | CDD:284282 | |||
NODP | 1680..1731 | CDD:284987 | |||
ANK | 1896..2038 | CDD:238125 | |||
ANK repeat | 1902..1948 | CDD:293786 | |||
ANK repeat | 1951..1981 | CDD:293786 | |||
Ank_5 | 1970..2025 | CDD:290568 | |||
ANK | 1978..2104 | CDD:238125 | |||
ANK repeat | 1984..2015 | CDD:293786 | |||
ANK repeat | 2017..2048 | CDD:293786 | |||
Ank_2 | 2022..2114 | CDD:289560 | |||
ANK repeat | 2050..2081 | CDD:293786 | |||
ANK repeat | 2083..2114 | CDD:293786 | |||
DUF3454 | 2627..2682 | CDD:288764 | |||
CRB2 | NP_775960.4 | Required for maximum inhibition of APP amyloid-beta peptide secretion. /evidence=ECO:0000269|PubMed:20299451 | 1..350 | 124/326 (38%) | |
EGF_CA | 108..144 | CDD:238011 | 11/35 (31%) | ||
EGF_CA | 147..182 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 184..221 | CDD:238011 | 18/36 (50%) | ||
EGF_CA | 226..259 | CDD:238011 | 15/32 (47%) | ||
EGF_CA | 321..356 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 358..393 | CDD:238011 | 16/34 (47%) | ||
Laminin_G_2 | 465..588 | CDD:280389 | 6/122 (5%) | ||
LamG | 653..773 | CDD:238058 | 12/122 (10%) | ||
EGF_CA | 812..842 | CDD:238011 | 13/29 (45%) | ||
LamG | 900..1024 | CDD:304605 | 21/131 (16%) | ||
EGF | 1060..1090 | CDD:278437 | 13/29 (45%) | ||
Interaction with EPB41L5. /evidence=ECO:0000269|PubMed:17920587 | 1249..1285 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.710 |