Sequence 1: | NP_001245510.1 | Gene: | N / 31293 | FlyBaseID: | FBgn0004647 | Length: | 2703 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001157038.1 | Gene: | Crb2 / 241324 | MGIID: | 2679260 | Length: | 1282 | Species: | Mus musculus |
Alignment Length: | 1424 | Identity: | 355/1424 - (24%) |
---|---|---|---|
Similarity: | 476/1424 - (33%) | Gaps: | 482/1424 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 176 ETKNLCASSPCRNGATCTALAGSSSFTCSCPPGFTGDTCSYDIEECQSNPCKYGGTCVNTHGSYQ 240
Fly 241 CMCPTGYTGKDCDTKYKPCSPSPCQNGGICRSNGLSYECKCPKGFEGKNCEQNYDDCLGHLCQNG 305
Fly 306 GTCIDGISDYTCRCPPNFTGRFCQDDVDECAQRDHPVCQNGATCTNTHGSYSCICVNGWAGLDCS 370
Fly 371 NNTDDCKQAACFYGATCIDGVGSFYCQCTKGKTGLLCHLDDACTSNPCHADAICDTSPINGSYAC 435
Fly 436 SCATGYKGVDCSEDIDECDQGSPCEHNGICVNTPGSYRCNCSQ-GFTGPRCETNINECESHPCQN 499
Fly 500 EGSCLDDPGTFRCVCMPGFTGTQCEIDIDECQSNPCLNDGTCHDKINGFKCSCALGFTGARCQIN 564
Fly 565 IDDCQSQPCRNRGI--------CHDSIAGYSCECPPGYTGTSCEININDCDSNPC-HRGKCIDDV 620
Fly 621 NSFKCLCDPGYTGYICQKQINECESNPCQFDGHCQDRVGSYYCQCQAGTSGKNCEVNVNECHSNP 685
Fly 686 CNNGATCI----DGINSYKCQCVPGFTGQHCEKNVDECISS---------PCANNGVCI------ 731
Fly 732 ---------DQVNGYKCECPRGFYDA----H-------CLSDV---------------------- 754
Fly 755 ---DECASNPCVNEGRCEDGINEFICHCPPG----YTGKRCELDIDECSSNPCQHGGT---CYDK 809
Fly 810 LNAFSCQCMP----GYTGQKCETNIDDCVTNPCGNGGTCIDKVNGYKCVCKVPFTGRDCESKMDP 870
Fly 871 CASNRCKNEAKCTPSSNF------------------------LDF------SCTCKLG------- 898
Fly 899 -------------------------------------YTG---------------RYCDEDIDEC 911
Fly 912 SL-----SSPCRNGASCLNVPGSYRCLCTKGYEGRDCAINTDDCASFPCQNGGTCLDGIGDYSCL 971
Fly 972 CVDGFDGKHCETDINECLSQPCQNGATCSQYVNSYTCTC--------PLGFSGINCQTNDEDCTE 1028
Fly 1029 SSCLNGGSCIDGINGYNCSCLAGYSGANCQYKLNKCDSNPCLNGATCHE----------QNNEYT 1083
Fly 1084 CHCPSGFTGKQCSEYVDWCG------------------QSPCENGATCSQMKHQFSCKCSAGWTG 1130
Fly 1131 KLCDVQTISCQD-----AADRKGLSLRQLCNNGTCKDY----GNSHVCYCSQGYAGSYCQKEIDE 1186
Fly 1187 CQSQPCQNGGTCRDLIGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRV-MNFSCSCPPG 1250
Fly 1251 TMGIICEINKDDCKPGACHNNGSCIDRVGGFECVCQPGFVGARCEGDINECLSNPCSNAGTLDCV 1315
Fly 1316 QLVNNYHCNCRPGHMGRHCEHKVDFCAQSPCQNGGNCNIRQSGHHCICNNGFYGKNCEL 1374 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
N | NP_001245510.1 | EGF_CA | 179..214 | CDD:238011 | 13/34 (38%) |
EGF_CA | 217..252 | CDD:238011 | 6/34 (18%) | ||
EGF_CA | 260..291 | CDD:238011 | 8/30 (27%) | ||
EGF_CA | 295..329 | CDD:238011 | 0/33 (0%) | ||
EGF_CA | 331..369 | CDD:238011 | 18/37 (49%) | ||
EGF_CA | 449..486 | CDD:238011 | 16/37 (43%) | ||
EGF_CA | 488..524 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 526..562 | CDD:238011 | 10/35 (29%) | ||
EGF_CA | 564..600 | CDD:238011 | 10/43 (23%) | ||
EGF_CA | 602..637 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 640..675 | CDD:238011 | 14/34 (41%) | ||
EGF_CA | 677..713 | CDD:238011 | 13/39 (33%) | ||
EGF_CA | 715..750 | CDD:238011 | 7/69 (10%) | ||
EGF_CA | 753..789 | CDD:238011 | 11/64 (17%) | ||
EGF_CA | 791..827 | CDD:238011 | 5/42 (12%) | ||
EGF_CA | 829..865 | CDD:238011 | 11/35 (31%) | ||
EGF_CA | 907..943 | CDD:238011 | 8/40 (20%) | ||
EGF_CA | 946..982 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 984..1020 | CDD:238011 | 12/43 (28%) | ||
EGF_CA | 1027..1058 | CDD:238011 | 7/30 (23%) | ||
EGF_CA | 1062..1095 | CDD:238011 | 4/42 (10%) | ||
EGF_CA | 1184..1219 | CDD:238011 | 13/34 (38%) | ||
EGF_CA | 1221..1257 | CDD:238011 | 15/36 (42%) | ||
EGF_CA | 1259..1295 | CDD:238011 | 7/35 (20%) | ||
EGF_CA | 1297..1335 | CDD:238011 | 6/37 (16%) | ||
EGF_CA | 1417..1450 | CDD:238011 | |||
NL | 1476..1512 | CDD:197463 | |||
Notch | 1519..1553 | CDD:278494 | |||
Notch | 1565..1593 | CDD:278494 | |||
NOD | 1599..1648 | CDD:284282 | |||
NODP | 1680..1731 | CDD:284987 | |||
ANK | 1896..2038 | CDD:238125 | |||
ANK repeat | 1902..1948 | CDD:293786 | |||
ANK repeat | 1951..1981 | CDD:293786 | |||
Ank_5 | 1970..2025 | CDD:290568 | |||
ANK | 1978..2104 | CDD:238125 | |||
ANK repeat | 1984..2015 | CDD:293786 | |||
ANK repeat | 2017..2048 | CDD:293786 | |||
Ank_2 | 2022..2114 | CDD:289560 | |||
ANK repeat | 2050..2081 | CDD:293786 | |||
ANK repeat | 2083..2114 | CDD:293786 | |||
DUF3454 | 2627..2682 | CDD:288764 | |||
Crb2 | NP_001157038.1 | EGF_CA | <79..110 | CDD:238011 | 14/65 (22%) |
EGF_CA | 112..148 | CDD:238011 | 18/38 (47%) | ||
EGF_CA | 151..186 | CDD:238011 | 18/73 (25%) | ||
EGF_CA | 188..225 | CDD:238011 | 16/37 (43%) | ||
EGF_CA | 230..263 | CDD:238011 | 17/32 (53%) | ||
EGF_CA | 324..360 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 362..397 | CDD:238011 | 14/34 (41%) | ||
Laminin_G_2 | 469..592 | CDD:280389 | 18/139 (13%) | ||
EGF | 613..643 | CDD:278437 | 11/29 (38%) | ||
LamG | 666..776 | CDD:238058 | 10/109 (9%) | ||
EGF | 814..844 | CDD:278437 | 13/29 (45%) | ||
Laminin_G_2 | 901..1018 | CDD:280389 | 16/130 (12%) | ||
EGF_CA | 1058..1089 | CDD:238011 | 12/30 (40%) | ||
EGF_CA | 1175..1206 | CDD:238011 | 12/30 (40%) | ||
Interaction with EPB41L5. /evidence=ECO:0000250|UniProtKB:Q5IJ48 | 1246..1282 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 51 | 1.000 | Domainoid score | I11481 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |