Sequence 1: | NP_001245510.1 | Gene: | N / 31293 | FlyBaseID: | FBgn0004647 | Length: | 2703 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_573502.2 | Gene: | Crb1 / 170788 | MGIID: | 2136343 | Length: | 1405 | Species: | Mus musculus |
Alignment Length: | 1415 | Identity: | 376/1415 - (26%) |
---|---|---|---|
Similarity: | 518/1415 - (36%) | Gaps: | 466/1415 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 327 FCQDDVDECAQRDHPVCQNGATCTNTHGSYSCICVNGWAGLDCSNNTD-DCKQAACFYGATCIDG 390
Fly 391 VGSFYCQCTKGKTGLLCHLDDACTSNPCHADAICDTSPINGSYACSCATGYKGVDCSEDIDECDQ 455
Fly 456 GSPCEHNGICVNTPGSYRCNCSQGFTGPRCETNINECESHPCQNEGSCLDDPGTFRCVCMPGFTG 520
Fly 521 TQCEIDIDECQSNPCLNDGTCHDKINGFKCSCALGFTGARCQINIDDCQSQPCRNRGICHDSIAG 585
Fly 586 YSCECPPGYTGTSCEININDCDSNPC-HRGKCIDDVNSFKCLC-DPGYTGYICQKQINECESNPC 648
Fly 649 QFDGHCQDRVGSYYCQCQAGTSGKNCEVNVNECHSNPCNNGATCID------------------- 694
Fly 695 -GINSYKCQCVPGFTGQHCEKNVDECISSPCANNGVCIDQVNGYKCECP-----RGFYDA-HCLS 752
Fly 753 DVDECASNPCVNEGRCEDGINEFICHCPPGYTGKRCELDIDECSSNPCQHGGTCYDKLNAFSCQC 817
Fly 818 MPGYTGQKCETNIDDCVTNPCGNGGTCIDKVNGYKCVCKVPFTG--------------------- 861
Fly 862 ----RDCESKMDPCASNRCK-------NEAKCTPSS---------NFLDFSC--TCKLGYTGRYC 904
Fly 905 DEDIDECSLSS------------------------PCRNGASCLNV------PGSYRCL------ 933
Fly 934 --------CTKGYEGRDCA--INTDDCASFPCQNGGTCLDGIGDYSCLCVDGFDGKHC------- 981
Fly 982 -----------------------------------------ETDINECLSQPCQNGATCSQYVNS 1005
Fly 1006 ----------------------------YTCTCPLGFSGINCQT------------NDEDCTESS 1030
Fly 1031 CLNGG---SCIDGI---------------NGYNCSCLAGYSGANCQYKLNKCDSNPCLNGATCHE 1077
Fly 1078 QNNEYTCHCPSGFTGKQCSEYVDWCGQSPCENGATCSQMKHQFSCKCSAGWTG------------ 1130
Fly 1131 -------------------------KLCDVQTISCQDAADRKGLSLR-------------QLCNN 1157
Fly 1158 GT----------------------------------------CKDYGNSHV-------------C 1169
Fly 1170 ---------YCS-----QGYAGSYCQKEI---------------DECQSQPCQNGGTCRDLIGAY 1205
Fly 1206 ECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRVMNFSCSCPPGTMGIICEINKDDCKPGACHN 1270
Fly 1271 NGSCIDRVGGFECVCQPGFVGARCEGDI-------NECLSNPCSNAGTLDCVQLVNNYHCNCRPG 1328
Fly 1329 HMGRHCEHKVDFCAQSPCQNGGNCNIRQSGHHCICNNGFYGKNCELSGQD 1378 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
N | NP_001245510.1 | EGF_CA | 179..214 | CDD:238011 | |
EGF_CA | 217..252 | CDD:238011 | |||
EGF_CA | 260..291 | CDD:238011 | |||
EGF_CA | 295..329 | CDD:238011 | 1/1 (100%) | ||
EGF_CA | 331..369 | CDD:238011 | 9/37 (24%) | ||
EGF_CA | 449..486 | CDD:238011 | 11/36 (31%) | ||
EGF_CA | 488..524 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 526..562 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 564..600 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 602..637 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 640..675 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 677..713 | CDD:238011 | 18/55 (33%) | ||
EGF_CA | 715..750 | CDD:238011 | 16/40 (40%) | ||
EGF_CA | 753..789 | CDD:238011 | 8/35 (23%) | ||
EGF_CA | 791..827 | CDD:238011 | 10/35 (29%) | ||
EGF_CA | 829..865 | CDD:238011 | 8/60 (13%) | ||
EGF_CA | 907..943 | CDD:238011 | 10/79 (13%) | ||
EGF_CA | 946..982 | CDD:238011 | 14/83 (17%) | ||
EGF_CA | 984..1020 | CDD:238011 | 8/63 (13%) | ||
EGF_CA | 1027..1058 | CDD:238011 | 8/48 (17%) | ||
EGF_CA | 1062..1095 | CDD:238011 | 14/32 (44%) | ||
EGF_CA | 1184..1219 | CDD:238011 | 13/49 (27%) | ||
EGF_CA | 1221..1257 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1259..1295 | CDD:238011 | 11/35 (31%) | ||
EGF_CA | 1297..1335 | CDD:238011 | 11/44 (25%) | ||
EGF_CA | 1417..1450 | CDD:238011 | |||
NL | 1476..1512 | CDD:197463 | |||
Notch | 1519..1553 | CDD:278494 | |||
Notch | 1565..1593 | CDD:278494 | |||
NOD | 1599..1648 | CDD:284282 | |||
NODP | 1680..1731 | CDD:284987 | |||
ANK | 1896..2038 | CDD:238125 | |||
ANK repeat | 1902..1948 | CDD:293786 | |||
ANK repeat | 1951..1981 | CDD:293786 | |||
Ank_5 | 1970..2025 | CDD:290568 | |||
ANK | 1978..2104 | CDD:238125 | |||
ANK repeat | 1984..2015 | CDD:293786 | |||
ANK repeat | 2017..2048 | CDD:293786 | |||
Ank_2 | 2022..2114 | CDD:289560 | |||
ANK repeat | 2050..2081 | CDD:293786 | |||
ANK repeat | 2083..2114 | CDD:293786 | |||
DUF3454 | 2627..2682 | CDD:288764 | |||
Crb1 | NP_573502.2 | EGF | 113..143 | CDD:394967 | 11/30 (37%) |
EGF_CA | 147..182 | CDD:238011 | 14/34 (41%) | ||
EGF_CA | 186..221 | CDD:238011 | 13/34 (38%) | ||
EGF_CA | 224..259 | CDD:238011 | 17/34 (50%) | ||
EGF_CA | 262..298 | CDD:238011 | 16/35 (46%) | ||
EGF_CA | <308..336 | CDD:238011 | 12/27 (44%) | ||
EGF_CA | 338..394 | CDD:238011 | 18/55 (33%) | ||
EGF_CA | 396..437 | CDD:214542 | 16/40 (40%) | ||
Laminin_G_2 | 513..648 | CDD:396680 | 22/139 (16%) | ||
EGF_CA | 675..706 | CDD:238011 | 12/30 (40%) | ||
Laminin_G_2 | 742..859 | CDD:396680 | 16/119 (13%) | ||
EGF_CA | 888..922 | CDD:238011 | 15/34 (44%) | ||
Laminin_G_2 | 979..1104 | CDD:396680 | 18/126 (14%) | ||
EGF_CA | 1140..1174 | CDD:238011 | 13/33 (39%) | ||
EGF_CA | 1176..1211 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 1213..1248 | CDD:238011 | 11/34 (32%) | ||
EGF_CA | 1296..1332 | CDD:238011 | 13/35 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100271 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.710 |