DRSC/TRiP Functional Genomics Resources

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Protein Alignment N and jag1

DIOPT Version :10

Sequence 1:NP_476859.2 Gene:N / 31293 FlyBaseID:FBgn0004647 Length:2703 Species:Drosophila melanogaster
Sequence 2:XP_002931784.1 Gene:jag1 / 100486874 XenbaseID:XB-GENE-485662 Length:1218 Species:Xenopus tropicalis


Alignment Length:1099 Identity:350/1099 - (31%)
Similarity:469/1099 - (42%) Gaps:221/1099 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 ISCKCPLGFDESLCEIAVPNACDHVTCLNGGTCQLKTLEEYTCACANGYTGERCETKNLCASSPC 186
            :|.:.|.|      |:...|.||.........|.....:.|...|...|      ...:.|...|
 Frog    40 LSMQNPNG------ELQSGNCCDGQRNPTDRKCSRDECDTYFKVCLKEY------QSRVSAGGAC 92

  Fly   187 RNGATCTALAGSSS-----------------FTCSCPPGFT---------------GDTCSYDIE 219
            ..|...|.:.|.:|                 |:.:.|..:|               ||.....:.
 Frog    93 SFGTGYTPVIGGNSFNLKYSRNNERNRIVLPFSFAWPRSYTLVVEAWDYNNDTNDPGDLIDKALH 157

  Fly   220 ECQSNPCKYGGTCVN----THGSYQ--CMCPTGYTGKDCDTKYKPCSPSPCQNGGICRSNGLSYE 278
            ....||.:...|...    ||..||  .:|...|.|..|:   |.|.|.                
 Frog   158 SGMINPSRQWQTLKQNAGMTHFEYQIRVICDEHYYGFGCN---KFCRPR---------------- 203

  Fly   279 CKCPKGFEGKNCEQNYDDCLGHLCQNGGTCIDGISDYTCRCPPNFTGRFCQDDVDECAQRDHPVC 343
                            ||..||              |||.                         
 Frog   204 ----------------DDFFGH--------------YTCD------------------------- 213

  Fly   344 QNGATCTNTHGSYSCICVNGWAGLDCSNNTDDCKQAACFYGATC-IDGVGSFYCQCTKGKTGLLC 407
            |||          :..|:.||.|.:|  |...|:|.......|| ..|    .|:|..|..|..|
 Frog   214 QNG----------NKTCLEGWMGPEC--NKAICRQGCSSKHGTCKTPG----ECRCQYGWQGQYC 262

  Fly   408 HLDDACTSNPCHADAICDTSPINGSYACSCATGYKGVDCSEDIDECDQGSPCEHNGICVNT-PGS 471
               |.|..:|......|     |..:.|.|.|.:.|..|.:|::.|....||.:.|.|.|| |..
 Frog   263 ---DKCIPHPGCVHGTC-----NEPWQCLCETNWGGQLCDKDLNYCGTYQPCLNGGTCSNTGPDK 319

  Fly   472 YRCNCSQGFTGPRCETNINECESHPCQNEGSCLDDPGTFRCVCMPGFTGTQCEIDIDECQSNPCL 536
            |:|:|.:|::|..||...:.|.|.||.|.||||:....|.|.|..|:||..|.|:||||..|||.
 Frog   320 YQCSCPEGYSGLNCEIAEHACLSDPCHNGGSCLETSVGFECQCARGWTGPTCSINIDECSPNPCG 384

  Fly   537 NDGTCHDKINGFKCSCALGFTGARCQINIDDCQSQPCRNRGICHDSIAGYSCECPPGYTGTSCEI 601
            ..|||.|.::||||.|...:||..|||:.::|:::||.|...|.:.|..|.|.|.||:||.:|:|
 Frog   385 YGGTCQDLVDGFKCICPSQWTGKTCQIDANECEAKPCVNANSCRNLIGSYYCNCLPGWTGQNCDI 449

  Fly   602 NINDCDSNPCHRGKCIDDVNSFKCLCDPGYTGYICQKQINECESNPCQFDGHCQDRVGSYYCQCQ 666
            |||||.....:.|.|.|.||.|:|:|.|||.|..|:|.:|||.||||...|||||.:..:.|.|.
 Frog   450 NINDCLGQCQNGGTCRDLVNGFRCICPPGYAGERCEKDVNECVSNPCLNGGHCQDEINGFQCLCP 514

  Fly   667 AGTSGKNCEVNVNECHSNPCNNGATCIDGINSYKCQCVPGFTGQHCEKNVDECISSPCANNGVCI 731
            ||.||..|:::::.|..:||.|||.|.:....|.|.|...:.|::|....|.|.::||.....|.
 Frog   515 AGFSGNLCQLDIDYCEPDPCQNGAQCFNLATDYFCNCSEDYEGKNCSHLKDHCRTTPCEVIDSCT 579

  Fly   732 DQVNGYKCECPRGFYDAHCLSDVDECASNPCVNEGRC--EDGINEFICHCPPGYTGKRCELDIDE 794
            ..|...  ..|.|         |...:||.|...|:|  :.| .:|.|.|..|:||..|..:|::
 Frog   580 VAVASN--STPEG---------VRYISSNVCGPHGKCRSQSG-GKFTCECNKGFTGTYCHENIND 632

  Fly   795 CSSNPCQHGGTCYDKLNAFSCQCMPGYTGQKCETNIDDCVTNPCGNGGTCIDKVNGYKCVCKVPF 859
            |.||||::||||.|.:|::.|.|..|:.|..|||||:||..|||.|||||.|.||.:.|.||..:
 Frog   633 CESNPCKNGGTCIDGVNSYKCICSDGWEGIYCETNINDCSKNPCYNGGTCRDLVNDFYCECKNGW 697

  Fly   860 TGRDCESKMDPCASNRCKNEAKCTPSSNFLDFSCTCKLGYTGRYCDEDIDECSLSSPCRNGASCL 924
            .|:.|.|:...|....|.|...|....:  .|.|.|..|:.|..|:...:...|.:||.||.:|:
 Frog   698 KGKTCHSRDSQCDEATCNNGGTCYDEGD--TFKCICPAGWEGATCNIARNSSCLPNPCFNGGTCV 760

  Fly   925 NVPGSYRCLCTKGYEGRDCAINTDDCASFPCQNGGTCLDGIGDYSCLCVDGFDGKHCETDINECL 989
            ....|:.|:|.:|:||..|:.||:||:..||.|.|||:||...|.|.|..||.|..|..:||||.
 Frog   761 VRGDSFTCVCKEGWEGPTCSQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQ 825

  Fly   990 SQPCQNGATCSQYVNSYTCTCPLGFSGINCQ--------TN----------DEDCTESSCLNGGS 1036
            |.||..||||...:|.|.||||.|.||..||        ||          |:||....||||  
 Frog   826 SSPCAFGATCIDEINGYRCTCPPGRSGPRCQEVTGRPCITNGHMMPDGAKWDDDCNSCQCLNG-- 888

  Fly  1037 CIDGINGYNCSCLAGYSGANCQYKLNKCDSNPCLNGATCHEQNNEYTCHCPSGFTGKQCSEYVD- 1100
                    ..:|...:.|.      .:||    ::|::          .||:|.|   |....| 
 Frog   889 --------KVTCSKVWCGP------QRCD----IHGSS----------ECPAGQT---CVPIRDN 922

  Fly  1101 WCGQSPCENGATC---SQMKHQFSCKCSAGWTGKLCDVQTISCQDAADRKGLSLRQLCN 1156
            .|...||.....|   :|...:..|..:|.:....|...|.:........||:...:||
 Frog   923 HCFVPPCTGVGECWPTNQPPVKTKCNANASYQDASCANITFTFNKEMMSPGLTTESICN 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NNP_476859.2 EGF_CA 179..214 CDD:238011 11/66 (17%)
EGF_CA 217..252 CDD:238011 10/40 (25%)
EGF_CA 260..291 CDD:238011 1/30 (3%)
EGF_CA 295..329 CDD:238011 7/33 (21%)
EGF_CA 331..369 CDD:238011 7/37 (19%)
EGF_CA 449..486 CDD:238011 14/37 (38%)
EGF_CA 488..524 CDD:238011 15/35 (43%)
EGF_CA 526..562 CDD:238011 18/35 (51%)
EGF_CA 564..600 CDD:238011 13/35 (37%)
EGF_CA 602..637 CDD:238011 17/34 (50%)
EGF_CA 640..675 CDD:238011 18/34 (53%)
EGF_CA 677..713 CDD:238011 11/35 (31%)
EGF_CA 715..750 CDD:238011 8/34 (24%)
EGF_CA 753..789 CDD:238011 13/37 (35%)
EGF_CA 791..827 CDD:238011 16/35 (46%)
EGF_CA 829..865 CDD:238011 19/35 (54%)
EGF_CA 907..943 CDD:238011 12/35 (34%)
EGF_CA 946..982 CDD:238011 18/35 (51%)
EGF_CA 984..1020 CDD:238011 20/35 (57%)
EGF_CA 1027..1058 CDD:238011 6/30 (20%)
EGF_CA 1062..1095 CDD:238011 7/32 (22%)
EGF_CA 1184..1219 CDD:238011
EGF_CA 1221..1257 CDD:238011
EGF_CA 1259..1295 CDD:238011
EGF_CA 1297..1335 CDD:238011
EGF_CA 1338..1373 CDD:238011
EGF_CA 1417..1450 CDD:238011
NL 1476..1512 CDD:197463
Notch 1519..1553 CDD:459658
Notch 1565..1593 CDD:459658
NOD 1598..1652 CDD:462014
NODP 1679..1731 CDD:462229
JMTM_dNotch 1719..1806 CDD:411989
ANK repeat 1902..1948 CDD:293786
ANKYR 1936..2139 CDD:440430
ANK repeat 1951..1981 CDD:293786
ANK repeat 1984..2015 CDD:293786
ANK repeat 2017..2048 CDD:293786
ANK repeat 2050..2081 CDD:293786
ANK repeat 2083..2114 CDD:293786
jag1XP_002931784.1 MNNL 32..185 CDD:462222 29/156 (19%)
DSL 167..229 CDD:128366 26/145 (18%)
EGF_CA 296..334 CDD:238011 14/37 (38%)
EGF 340..370 CDD:394967 15/29 (52%)
EGF_CA 374..410 CDD:238011 18/35 (51%)
EGF_CA 412..447 CDD:238011 13/34 (38%)
EGF_CA 450..485 CDD:238011 17/34 (50%)
EGF_CA 487..523 CDD:238011 18/35 (51%)
EGF_CA 525..560 CDD:238011 11/34 (32%)
EGF_CA 629..665 CDD:238011 16/35 (46%)
EGF_CA 667..702 CDD:238011 19/34 (56%)
EGF 709..739 CDD:394967 9/31 (29%)
EGF 748..778 CDD:394967 12/29 (41%)
EGF_CA 782..817 CDD:238011 18/34 (53%)
EGF_CA 820..856 CDD:238011 20/35 (57%)
VWC_out 863..929 CDD:214565 21/98 (21%)
Blue background indicates that the domain is not in the aligned region.

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