DRSC/TRiP Functional Genomics Resources

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Protein Alignment kirre and ush2a

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_009291422.1 Gene:ush2a / 568982 ZFINID:ZDB-GENE-060503-794 Length:5243 Species:Danio rerio


Alignment Length:1125 Identity:213/1125 - (18%)
Similarity:335/1125 - (29%) Gaps:372/1125 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 DSSSSSSSSSSSSGSSSAAASSANDES------KP------------KGGDNGG----------- 81
            |...|:.:|.:..|:.|....:..|.|      :|            :||..||           
Zfish  1911 DGCLSADTSVNCRGNDSILVYTGRDRSAEDLTLQPFTEYLYRVMASGEGGWIGGPWQRGRSRETV 1975

  Fly    82 QHFAMEPQDQTAVVGSRVTL----PCR---VMEKVGALQWTKD---------DFGLGQH--RNLS 128
            ....:.|....:|.||.|.:    |..   |:||.....:::|         .|...||  ..||
Zfish  1976 PQSVLPPSRVGSVNGSSVEVSWEEPAEVRGVIEKYVLKAYSRDRPSSSPISATFPHSQHLTGTLS 2040

  Fly   129 G---FERYSMV------GSDEEGDFSLDI-----------------YPLMLDDDAKYQCQVGPGP 167
            |   |..||:.      ....|..|:...                 ||..|.....:.    |.|
Zfish  2041 GLAPFSSYSITLTACTQAGCSESPFATGFNTPQEAPEEVPPPAAVSYPNSLSVHWNHP----PKP 2101

  Fly   168 QGEQGIRSRFAKLTVLVPPEAPKITQGDYLVTTEDREIELECVSQGGKPAAEITWIDGLGNVLTK 232
            .|.......:...|||....:......|..|.|..:.:...|...|...:.::|...|     ..
Zfish  2102 NGIIIQYILYKNNTVLYRGNSTSFNITDVGVFTPHKLLLSACTEAGCTNSTQVTLFTG-----QL 2161

  Fly   233 GIEYVKEPL---ADSRRITARSILKLAPKKEHHNTTFTCQAQNTADR----TYRSAKLLLEVKYA 290
            ...||:.|:   .|:|.|   .|...||.:.:....|....|.....    .|.|::|..:  |.
Zfish  2162 PPTYVEPPILTVLDARSI---HIQWAAPVEVNGLLEFYTLHQWALGEEPLIVYNSSELFQD--YT 2221

  Fly   291 PKVIVS------VVGGALAGG-----------------KIPEGAEVILSCQADANPHELSYRW-- 330
            .:.:|.      .:.....||                 ::|  |..|||    .:||.|...|  
Zfish  2222 VRNLVPGSTYLFQIAACTGGGCTLSDPSTARTEESSPEEVP--APNILS----LSPHSLHLSWTP 2280

  Fly   331 -------------------FINDELM---TGDFTTKMIIHNVSRQYHDAIVKCEVVN-AVGKSEQ 372
                               ..|..||   .||. :...:|:...|      .|.... |:|...:
Zfish  2281 PRKPNGVISSYGLWMDGTLVQNSSLMASEVGDL-SPWSLHSFRVQ------ACTAQGCALGPLVE 2338

  Fly   373 SKKLDISFGP-------VFRQRPVSVEADLGATVSMRCDVAGNPEPEIEWI------SENSDQVV 424
            |:.|::.  |       ||.:.|.||.|        :.:....|...:.:.      .:|...:.
Zfish  2339 SRTLEMP--PVGHVTLVVFSETPHSVRA--------KWEAPAEPNGNLTYTVLFAGPGQNFSSLD 2393

  Fly   425 GVAAELKLKVSSETAGRYFC----------KAVVNGFPEIGAEATLYVKRAPIITSHKVQFGGVG 479
            ....|::..:|:...|::..          ..:|.....:|.     |:.:|:..|  :..|...
Zfish  2394 TPDTEMRELLSTGKEGQWVSIGGLLPYSNYSVMVKACNSLGC-----VESSPVSVS--LPPGAPD 2451

  Fly   480 GRVKIDCLAFSIPKAEHILWSFEGKIINMSSADPDIYIFEEHHLPEGVRAALIIRDSKATH---- 540
            | :....||.:.|.:..:.|:...:                |:.|..:|..|.:|.|.:|.    
Zfish  2452 G-LLAPRLAAATPTSLQVSWAAPAR----------------HNAPGALRYRLQMRSSASTQLHQL 2499

  Fly   541 -----------------FGKYN--CTVMNSYGGDS----LVITLLREPGNI--PVLLVVMGSMFC 580
                             |.:|:  ..|.||||..|    .:.|....||.:  |||..:....  
Zfish  2500 MDDETTTFSHTVTDLEPFTEYHFRLLVSNSYGETSSPWVSLFTAQDRPGAVDPPVLSDIQSRS-- 2562

  Fly   581 VAIILM--------IVMIIIVYRKRRSRKKPMPADVIPEASRGGDKLNELKSELRSKAYDVEYSE 637
             |.|..        |:....:|:.|:....      :||.|. ...|:.| :..:.....||...
Zfish  2563 -AFISWSPPSQPNGIITHYNIYQNRQLTTS------VPENST-SHMLSHL-TPFQQYTIQVEACT 2618

  Fly   638 AGGDGLA-----INLTQSPMPDVQMKGATLGVPL------AGPVKFDERFSGDFGGDRYNRQCHI 691
            |.|..|:     ||...:|..||.........|.      |.|    ...:|:..|....|:   
Zfish  2619 AAGCTLSAESHTINTPPAPPEDVPAPQLYSDTPTSVLLSWAAP----RLVNGELDGYTVERR--- 2676

  Fly   692 KNLKNQQETAYKGSPQANGYAHYFEYALDYSPPGGEGAAVVVGSGGVGKLKNGGMNSA------T 750
              :...||.:...:.|.|....|.:.:...||.......:|..:      :.||.||:      |
Zfish  2677 --VSGTQEISTVATIQPNQTLTYLDSSATLSPWSSYEYRIVAHT------RLGGSNSSVWEKVTT 2733

  Fly   751 LPHSAAATVNGGGAGNGGGASLPRNQRHEIQQSQQSNGFLGQPLLQNGIDSRFSAIYGNPYL-RT 814
            .|...|......|...|     |.:    :|.:..:      ||:.||...|:......|.: .|
Zfish  2734 RPSRPAGMQPPDGVVLG-----PES----VQVTWAA------PLIPNGEIERYEIRMPEPRIPHT 2783

  Fly   815 NSSLLPPLPPPSTANPAATPAPPPYHAARHGHAHHANGGLKHFVGGAVITTSPVGNVNINGGGGG 879
            |.|||.                            |...||..:.|.::...:             
Zfish  2784 NMSLLT----------------------------HTVSGLMPYTGYSITILA------------- 2807

  Fly   880 GSTPSGGGGVGVGVAAGGSVSGSSSNLTASSNTLAATP----------LAGGGVGNSGQCAQSPS 934
               .|||         ||.|.|.:.:|.....||...|          ::...:..|.|....|:
Zfish  2808 ---CSGG---------GGHVGGCTESLPTLVTTLPTIPQGLSPLSVVAISESFLAVSWQLPSRPN 2860

  Fly   935 GQFILSNNGKGHTQKGPLAT 954
            |..|.....:..||: |||:
Zfish  2861 GPNIRFELLRRKTQQ-PLAS 2879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 28/139 (20%)
IG_like 88..182 CDD:214653 27/137 (20%)
C2-set_2 189..279 CDD:285423 18/96 (19%)
Ig_2 307..379 CDD:290606 21/96 (22%)
I-set 382..462 CDD:254352 14/102 (14%)
IGc2 396..446 CDD:197706 5/65 (8%)
Ig 466..561 CDD:299845 23/121 (19%)
IG_like 478..561 CDD:214653 20/109 (18%)
ush2aXP_009291422.1 Laminin_G_3 160..297 CDD:290121
Laminin_N 307..528 CDD:295486
EGF_Lam 529..577 CDD:238012
EGF_Lam 586..638 CDD:238012
Laminin_EGF 653..703 CDD:278482
Laminin_EGF 706..756 CDD:278482
EGF_Lam 759..797 CDD:214543
Laminin_EGF 808..857 CDD:278482
EGF_Lam 859..912 CDD:238012
EGF_Lam 913..963 CDD:238012
EGF_Lam 965..1014 CDD:238012
EGF_Lam 1015..1064 CDD:238012
FN3 1177..1253 CDD:238020
FN3 1264..1375 CDD:238020
FN3 1386..1469 CDD:214495
LamG 1537..1699 CDD:238058
LamG 1737..1890 CDD:238058
FN3 1981..2071 CDD:238020 21/89 (24%)
FN3 2163..2253 CDD:238020 18/94 (19%)
FN3 2258..2341 CDD:238020 20/95 (21%)
FN3 2352..2443 CDD:238020 15/103 (15%)
FN3 2447..2544 CDD:238020 22/113 (19%)
FN3 2547..2633 CDD:238020 21/96 (22%)
FN3 2635..2733 CDD:238020 21/112 (19%)
FN3 2743..2807 CDD:238020 19/106 (18%)
FN3 2830..2932 CDD:238020 11/51 (22%)
fn3 2939..3014 CDD:278470
FN3 3032..>3099 CDD:238020
FN3 3542..3611 CDD:238020
FN3 3615..3701 CDD:238020
fn3 3718..3784 CDD:278470
FN3 3801..3887 CDD:238020
FN3 3908..3971 CDD:238020
FN3 3996..4086 CDD:238020
FN3 4186..4284 CDD:238020
fn3 4288..4366 CDD:278470
FN3 4382..4465 CDD:238020
FN3 4470..4553 CDD:238020
FN3 4555..4653 CDD:238020
FN3 4679..4753 CDD:238020
fn3 4760..4830 CDD:278470
FN3 4864..4955 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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