DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kirre and paplna

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:456 Identity:94/456 - (20%)
Similarity:149/456 - (32%) Gaps:142/456 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SSHHGDSSSSSSSSSSSSGSSSA-----AASSANDESKPKGG--DNGGQHFAMEPQDQTAVVGSR 98
            |..||.....:....||||:..|     .||:|..:|.|...  ..|......:|.....:||.|
Zfish   785 SLQHGRRRFPAHVQLSSSGAHRAQRAHQPASNAMQQSNPAASWTAEGVSIDKTDPSTVEGLVGQR 849

  Fly    99 VTLPCRVMEKVGA---LQWTKDDFGLGQHRNLSGFERYSMVGSDEEGDFSLDIYPLMLDDDAKYQ 160
            |.|||||.....:   ::|.:|...:...|:            :::.|.||.:.|:.|.|...:.
Zfish   850 VVLPCRVTPPPSSAVLVEWRRDGVPVDPTRH------------EQQLDGSLLVGPITLQDSGWFL 902

  Fly   161 CQVGPGPQGEQGIRSRFAKLTVLVPPEAPKITQGDYLVTTED-----REIELECVSQGGKPAAEI 220
            |                                    |.|.|     |.|.|. ||...:..|.|
Zfish   903 C------------------------------------VATRDDKRDHRYIYLS-VSGSSQNNAGI 930

  Fly   221 TWIDGLGNVLTK-----GIEYVKEPLADSRR-ITARSILKLAPKKEHHNTTFTCQAQNTADRTYR 279
            :.:|...:..::     .|:|  .||.::|. .||:....:.|....|..|.         ...|
Zfish   931 SEVDSSQSYTSQSSSRFNIDY--SPLVEARAGQTAKLQCSVLPVSAIHAVTI---------HWSR 984

  Fly   280 SAKLLLEVKYAPKVIVSVVGGALAGGKIPEGAEVILSCQADANPHELSYRWFINDELMTGDFTTK 344
            :.:.|..::::               :..:|..||....||.                :|.:|  
Zfish   985 AGQPLNSLRHS---------------QHSDGTLVIKQLTADD----------------SGLYT-- 1016

  Fly   345 MIIHNVSRQYHDAIVKCEVVNAVGKSEQSKKLDISFGPVFRQRPVSVEADLGATVSMRCDVAGNP 409
                            |.|.:|....|:..:|.:.......:.|:.|:...|:|..:.|.|.|. 
Zfish  1017 ----------------CTVTDAQKFEERQVQLRVLGDLRITKAPIDVDVVQGSTAQLACVVTGE- 1064

  Fly   410 EPEIEWISENSDQV------VGVAAELKL---KVSSETAGRYFCKAVVNGFPEIGAEATLYVKRA 465
            ...:.| |.|...|      |.|:|:..|   .|.|...|.|.|.| ..|...:.|.|.:.:.:.
Zfish  1065 NVNVGW-SRNGVPVRPDGHRVHVSADGTLILNNVQSVDEGTYTCNA-YTGTLSVSAAAEIRLAKT 1127

  Fly   466 P 466
            |
Zfish  1128 P 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 20/98 (20%)
IG_like 88..182 CDD:214653 20/96 (21%)
C2-set_2 189..279 CDD:285423 21/100 (21%)
Ig_2 307..379 CDD:290606 12/71 (17%)
I-set 382..462 CDD:254352 24/88 (27%)
IGc2 396..446 CDD:197706 18/58 (31%)
Ig 466..561 CDD:299845 1/1 (100%)
IG_like 478..561 CDD:214653
paplnaXP_005169942.1 TSP1 24..75 CDD:214559
ADAM_spacer1 181..293 CDD:310520
TSP1 303..356 CDD:214559
TSP1 388..442 CDD:214559
TSP1 449..498 CDD:214559
TSP1 504..557 CDD:214559
KU 720..771 CDD:238057
Ig_3 839..906 CDD:316449 21/114 (18%)
IGc2 960..1022 CDD:197706 16/119 (13%)
I-set 1039..1121 CDD:333254 23/84 (27%)
PLAC 1142..1173 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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