DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kirre and sns

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster


Alignment Length:1183 Identity:236/1183 - (19%)
Similarity:379/1183 - (32%) Gaps:412/1183 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KRMRSSRLLVLPLI-LVLILTLLLQPIAVHAKSKKNKSSQSSHHGDSSSSSSSSSSSSGSSSAAA 65
            :|.|...:..|.|: |:.::.|...|:..||:.:|                              
  Fly    39 RRCRQHWIKHLQLLRLLAVIVLASAPVPSHAQQQK------------------------------ 73

  Fly    66 SSANDESKPKGGDNGGQHFAMEPQDQTAVVGSRVTLPCRVMEKVGALQWTKDDFGLGQHRNLSGF 130
                              |...|.|...:.|:...:.|.|....||:|||||.|.||....:.||
  Fly    74 ------------------FRTTPHDLQVLEGAEAMMRCEVANVAGAVQWTKDGFALGFSAVIPGF 120

  Fly   131 ERYSMVGSDEEGDFSLDIYPLMLDDDAKYQCQVGPGPQGEQGIRSRFAKLTVLVPPEAPKI---T 192
            .|||::|..::|.::|.|....::|||.|||||||. :....||:. |||||:.||.:.:|   :
  Fly   121 PRYSVLGDRKQGIYNLRISNASINDDADYQCQVGPA-RLNSAIRAN-AKLTVISPPASIEIKGYS 183

  Fly   193 QGDYLVTTEDREIELECVSQGGKPAAEITWIDGLGNVLTKGIEYVKEPLAD------SRRITARS 251
            ....:...|:::::|:|:....||||:|.|..|       .:||..|...|      ::|.|..|
  Fly   184 HNSKVEVRENQDLQLKCIVANAKPAAQIVWYRG-------NVEYKPEKREDTVEESTAKRFTTTS 241

  Fly   252 ILKLAPKKEHHNTTFTCQAQNTA---DRTYRSAKLLLEVKYAPKVIVSVVGGALAGGKIPEGAEV 313
            .|||.|..:...|.:||||::.|   |...| |.:.|.|.|.|.  ...:.|..||..:..|..|
  Fly   242 SLKLKPGPDDDYTEYTCQARHKALSPDMPMR-ATVQLSVLYPPG--PPYIEGYSAGETLRRGQTV 303

  Fly   314 ILSCQADANPHELSYRWFINDELM------TGDFTTKMIIHNVSRQYHDAIVKCEVVNAVGKSEQ 372
            .|.|::..........|:.|...:      :|..:..:.........:.|..:||..|.:  |:.
  Fly   304 ELMCRSRGGNPPAQLIWYKNGSQIRMAYRTSGRLSENIYTFTAEAGDNKARFRCEASNVM--SQN 366

  Fly   373 SKKLDISFGPVFRQRPVSV----EADLGATVSMRCDVA-GNPEPEIEW----------------- 415
            ..|.::....:|....|:|    ||.:|..|.:.|..| .||..||:|                 
  Fly   367 PLKAEVELSVLFAPTHVTVMGPTEARVGDIVPLTCTTAPSNPPAEIKWMVGGRQVRNATSKTIVS 431

  Fly   416 --------------ISENSDQVVGVAAELKLKVSSETAGRYFCKAVVNGFPEIGAEATLYVKRAP 466
                          :..|...:|.:...|.::::......:    .:|         .||....|
  Fly   432 PEGGWTTTSNITAVVEPNKRSLVVICHGLNMQLTENVVSTH----TIN---------VLYPPAPP 483

  Fly   467 IITSH-KVQFGGVGGRVKIDCLAFSIPKAEHILWSFEGKIIN----------------------- 507
            :|:.: :.|....|...|:.|::........:.|....|.||                       
  Fly   484 LISGYMEGQIIPAGSVQKLLCVSSGGNPLATLTWYKNDKRINSVIRAADKSVSAEITILANVSDN 548

  Fly   508 -------MSSADPDIYIFEE-----HHLPEGVR------------AALIIRDSKATHFGKYNCTV 548
                   .|::..:|.:|:.     |..||.|:            .|.||.||.::     |...
  Fly   549 QAQYRCEASNSATEIPLFQSTTLSVHFAPETVKIRIEPEELRPGMEATIICDSSSS-----NPPA 608

  Fly   549 MNSYGGDSLVITLLR---EPG-----------NIPVLLVVMGSMF-CVAIILMI-------VMII 591
            ..|:..|.:.|..:.   :||           .:.|...:.|.:: |.:....:       |.:.
  Fly   609 KLSWWKDGIPIEGINNTSKPGLWGGTVSTLEFRVNVTQEMNGQVYTCQSANEALQRSAHEAVSLD 673

  Fly   592 IVYRKR---------------------RSRKKPMP--------ADVIPE---------------- 611
            ::||.:                     ::|..|.|        ...||:                
  Fly   674 VLYRPKFVPPPSSTAVGVEGESLQVSLQTRANPTPVTYKWTKDGTTIPQDGDHRIFADGGSLNFT 738

  Fly   612 ---------------ASRGGDKLN-----ELKSELRSKAYDVEYSEAGGDGLAINLTQSPMPDVQ 656
                           .|:||..||     |..:.::|.:.::..:......|:..:...|:.:..
  Fly   739 RLHRDDAGIYSCSASNSQGGATLNITVVVEYGTTIKSVSENIVVNPGEDAMLSCTVEGKPLTEEH 803

  Fly   657 MKGATLGVPLAGPVKFDERFSGDFGGDRYNRQCHIKNLKNQQETAYK------------------ 703
            :|...:|..:.  ||....|:   .|..|   .|||:.|.:....::                  
  Fly   804 VKWERVGYDMT--VKTSTTFA---NGTSY---LHIKDAKREDVGNFRCVADNRVDNPTNRDILLI 860

  Fly   704 -------------------------------GSPQA--------------NGYAHYFE------- 716
                                           |||:.              ..|.:..|       
  Fly   861 VKFAPEIAKTPTLLRAASGTGERGRLPCRAQGSPKPQFIWRQDKKDLPINRTYKYEVEERKIDSL 925

  Fly   717 -----YALDYSPPGGEGAAVVVGSGGVGKLKNG-------------GMNSATLPHSAAATVNGGG 763
                 ..:|...|...||...|....:|:....             .:|...:.|.....  ...
  Fly   926 TYESTLIVDKVAPADYGAYECVARNELGEAVETVRLEITSQPDPPLSLNILNVTHDTVTL--AWT 988

  Fly   764 AGNGGGASLPRNQRHEIQQSQQSNGFLGQP----LLQNGIDSRFSAIYGNPYLRTN----SSLLP 820
            .|..||.......|:.:...:|.....|.|    |...|:  |.:.:|....:..|    ||.||
  Fly   989 PGFDGGLKASYRVRYRMADREQYKYIDGLPNSHKLTIGGL--RMNTLYLFSVMSWNELGQSSYLP 1051

  Fly   821 PLPPPSTANPAATPAPPPYHAARHGHAHHANGGLKHFVGGAVITTSPVGNVNINGGGGGGSTPSG 885
            .|     |......||||.|.|..             :||...|||              .||.|
  Fly  1052 DL-----ARAETKEAPPPSHPASS-------------LGGGPPTTS--------------QTPLG 1084

  Fly   886 G--GGVGVGVAAG 896
            |  |.:.|||.||
  Fly  1085 GTSGMLLVGVGAG 1097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 40/95 (42%)
IG_like 88..182 CDD:214653 39/93 (42%)
C2-set_2 189..279 CDD:285423 29/101 (29%)
Ig_2 307..379 CDD:290606 13/77 (17%)
I-set 382..462 CDD:254352 19/115 (17%)
IGc2 396..446 CDD:197706 12/81 (15%)
Ig 466..561 CDD:299845 26/142 (18%)
IG_like 478..561 CDD:214653 23/129 (18%)
snsNP_001036532.1 I-set 73..170 CDD:254352 41/146 (28%)
Ig 76..155 CDD:299845 32/78 (41%)
IG_like 186..279 CDD:214653 31/100 (31%)
Ig 197..279 CDD:299845 30/89 (34%)
IG_like 296..376 CDD:214653 13/81 (16%)
Ig 300..361 CDD:299845 10/60 (17%)
Ig 380..454 CDD:299845 14/73 (19%)
IG_like 490..573 CDD:214653 11/82 (13%)
Ig 501..560 CDD:299845 7/58 (12%)
Ig 584..666 CDD:299845 14/86 (16%)
IG_like 585..666 CDD:214653 14/85 (16%)
I-set 678..767 CDD:254352 10/88 (11%)
IGc2 692..757 CDD:197706 6/64 (9%)
Ig 788..849 CDD:143165 13/68 (19%)
Ig 885..960 CDD:143165 11/74 (15%)
FN3 967..1051 CDD:238020 16/87 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451324
Domainoid 1 1.000 42 1.000 Domainoid score I8442
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11640
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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