DRSC/TRiP Functional Genomics Resources

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Protein Alignment kirre and Dscam2

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster


Alignment Length:858 Identity:171/858 - (19%)
Similarity:286/858 - (33%) Gaps:226/858 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 DQTAVVGSRVTLPCRVM-EKVGALQWTKDDFGLGQHRNLSGFERYSMVGS--DEEGDF--SLDIY 149
            :||...|..|:|.|... .....:.||.|.|.|..:...       |:|.  ...||.  .::|.
  Fly   431 EQTLQPGPAVSLKCSAAGNPTPQISWTLDGFPLPSNGRF-------MIGQYITVHGDVISHVNIS 488

  Fly   150 PLMLDDDAKYQCQVGPGPQGEQGIRSRFAKLTVLVPPE---APKITQGDYLVTTEDREIELECVS 211
            .:|::|..:|.|..    :...|.....|:|.:...|.   .||:|      ......:.|:| .
  Fly   489 HVMVEDGGEYACIA----ENRAGRVQHAARLNIYGLPYIRLIPKVT------AVSGETLNLKC-P 542

  Fly   212 QGGKPAAEITWIDGLGNVLTKGIEYVKEPLADSRRITARSILKLAP-KKEHHNTTFTCQAQNTAD 275
            ..|.|..||.|..| |..|...|.         :|:.....|.::| :|...:..:||.|:|...
  Fly   543 VAGYPIEEIHWERG-GRELPDDIR---------QRVQPDGSLTISPVQKNSDSGVYTCWARNKQG 597

  Fly   276 RTYR---SAKLLLEVKYAP--------------KVIVSVVGGALAGGKIPEGAEVILSCQADANP 323
            .:.|   ...:::..|.:|              .:..|||.|.|         .:.::.:.|..|
  Fly   598 HSARRSGEVTVIVPPKLSPFQTNILQLNMGDRASLTCSVVKGDL---------PLTINWRKDGRP 653

  Fly   324 HELSYRWFINDELMTGDFTTKMIIHNVSRQYHDAIVKCEVVNAVGKSEQSKKLDISFGPVFRQRP 388
            .:.:....:.   ....:.:.::|.|:... |.....|.|.|:..:.|.|:.|.::..|.:...|
  Fly   654 IDPTQHMSVK---QVDQYNSILVIENLGSD-HTGNYSCVVRNSAAEVENSQALLVNVPPRWIVEP 714

  Fly   389 VSVEADLGATVSMRCDVAGNPEPEIEWISENSD--------------QVVGVAAELKLKVSSETA 439
            |....:....:.:.|...|.|.|.|.|......              :::|..:.|...|..:..
  Fly   715 VDANVERNRHIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFTKLLGNGSLLLQHVKEDRE 779

  Fly   440 GRYFCKAVVNGF-PEIGAEATLYVKRAPII--TSHKVQFGGVGGRVKIDCLAFSIPKAEHILWSF 501
            |.|.|:| .||. ..||....|.|..:|..  ||..|.. ..|....:.| |.|..|..:|:|..
  Fly   780 GFYLCQA-NNGIGTGIGKVIQLKVNSSPYFSSTSRSVMV-KKGDTALLQC-AVSGDKPINIVWMR 841

  Fly   502 EGKIINMSSADPDIYIFEEHHLPEGVRAALIIRDSKATHFGKYNCTVMNSYGGDSLVITL-LREP 565
            .||.....|.:..|.:.:| ..|:||.|.|.||...||..|.|.|...|.||.|..::.| ::||
  Fly   842 SGKNTLNPSTNYKISVKQE-ATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQLQVQEP 905

  Fly   566 GNIPVLLVVMGSMFCVAIILMIVMIIIVYRKRRSRKKPMPADVIPEASRGGDKLNELKSELRS-- 628
                                                 |:|..|:..|......:| :|.:.::  
  Fly   906 -------------------------------------PLPPSVLEAAMISSRSVN-IKWQPKTLG 932

  Fly   629 ----KAYDVEYSEAGGDGLAINLTQSPMPDVQMKGATLGVPLAGPVKFDERFSGDFGGDRYNRQC 689
                ..|.||:.||          ...:|..........:.:..|..|:               .
  Fly   933 TGDVTKYIVEFREA----------DHSLPPALFVDQWQQIEVKDPPHFN---------------A 972

  Fly   690 HIKNLKNQQETAYK----GSPQANGYAHYFEYALDYSPPGGEGAA-----------VVVGSGGVG 739
            .|:|||.....|::    ||...:..:.......:...|.|...:           ::.....:.
  Fly   973 MIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARPLSSTELLISWVAPLP 1037

  Fly   740 KLKNGGMNSATLPHSAAA---------TVNGGGAGNGGG---ASLPRNQRHEI---QQSQQSNGF 789
            :|::|.:....:.:..::         :|:|.|.|..|.   :.|.:..|:.:   ..:|...|.
  Fly  1038 ELRHGDIQGYNVGYKLSSSGNTAYNFTSVSGDGDGGNGELLLSGLAKFARYTVVVQAFNQVGPGP 1102

  Fly   790 LGQPLLQNGIDSRFSAIYGNPYLRTNSSLLPPLP--PPSTANPAATPA--------PPPYHAARH 844
            |.:|                    |.:..:..:|  ||.....||..:        |||      
  Fly  1103 LSEP--------------------TAAQTMEDVPSRPPEDVRCAALSSQSLQVSWQPPP------ 1141

  Fly   845 GHAHHANGGLKHF 857
              .:|.||.|:.:
  Fly  1142 --IYHTNGLLQGY 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 23/97 (24%)
IG_like 88..182 CDD:214653 23/96 (24%)
C2-set_2 189..279 CDD:285423 22/90 (24%)
Ig_2 307..379 CDD:290606 11/71 (15%)
I-set 382..462 CDD:254352 21/94 (22%)
IGc2 396..446 CDD:197706 12/63 (19%)
Ig 466..561 CDD:299845 32/96 (33%)
IG_like 478..561 CDD:214653 28/82 (34%)
Dscam2NP_001261500.1 Ig 51..127 CDD:299845
Ig 138..>203 CDD:299845
I-set 238..327 CDD:254352
Ig 247..327 CDD:299845
I-set 332..418 CDD:254352
IGc2 344..407 CDD:197706
IG_like 432..517 CDD:214653 23/95 (24%)
IGc2 436..507 CDD:197706 18/81 (22%)
I-set 521..610 CDD:254352 24/105 (23%)
IGc2 533..597 CDD:197706 19/74 (26%)
Ig 630..699 CDD:143165 14/81 (17%)
IG_like 714..802 CDD:214653 20/88 (23%)
Ig 725..802 CDD:299845 18/77 (23%)
Ig 823..894 CDD:143165 26/72 (36%)
FN3 906..1006 CDD:238020 21/125 (17%)
FN3 1013..1111 CDD:238020 15/117 (13%)
FN3 1119..1209 CDD:238020 11/42 (26%)
FN3 1219..1313 CDD:238020
Ig 1336..1402 CDD:143165
FN3 1409..1498 CDD:238020
FN3 1515..1588 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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