DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kirre and sdk

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster


Alignment Length:670 Identity:137/670 - (20%)
Similarity:219/670 - (32%) Gaps:232/670 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 FAMEPQDQTAVV--GSRVTLPCRVMEKVG----ALQWTKDDFGLGQHRNLSGFERYSMVGSDEEG 142
            |...|....::|  ||...|.|..:   |    ..:|.||...:|...: |.|.|:.....::.|
  Fly    74 FTTHPSSSGSIVSEGSTKILQCHAL---GYPQPTYRWLKDGVPVGDFSS-SQFYRFHSTRREDAG 134

  Fly   143 DFSL--------------DI---------------------YPLMLD---------DDAKYQCQV 163
            .:..              |:                     :|.:.|         ....:|.:.
  Fly   135 SYQCIARNDAGSIFSEKSDVVVAYMGIFENTTEGRLTVISGHPAIFDMPPIESIPVPSVMWQSED 199

  Fly   164 GP--------------------GPQGEQGIR-------------SRFAKLTV------------L 183
            ||                    .....:|.|             |.|..|.|            :
  Fly   200 GPLNYDIKYAFTHANQLIILSADENDRKGYRAKAINTQLGKEESSAFVHLNVSGDPYIEVAPEII 264

  Fly   184 VPPEAPKITQGDYLVTTEDREIELECVSQGGKPAAEI--TWI-DGLGNVLTKGIEYVKEPLADSR 245
            |.|:..|:..|..:|       ||:|:: ..:|..|:  .|: |||. |.|.|   |:..|.|..
  Fly   265 VRPQDVKVKVGTGVV-------ELQCIA-NARPLHELETLWLKDGLA-VETAG---VRHTLNDPW 317

  Fly   246 RITARSILKLAPKKEHHNTTFTCQAQ-NTADRTYRSAKLLLEVKYAPKVIVSVVGGALAGGKIPE 309
            ..|    |.|......|:..:|||.: .:......||...|::...|.....:  .|...|:.  
  Fly   318 NRT----LALLQANSSHSGEYTCQVRLRSGGYPAVSASARLQILEPPLFFTPM--RAETFGEF-- 374

  Fly   310 GAEVILSCQADANPHELSYRWFINDE-----LMTGDFT---------TKMIIHNVSRQYHDAIVK 360
            |.:|.|:|.....|.. ..:||.|.|     :.:|.:|         .|:|:.:.      |:.:
  Fly   375 GGQVQLTCDVVGEPTP-QVKWFRNAESVDAHIESGRYTLNTDNTLVIKKLILDDA------AMFQ 432

  Fly   361 CEVVNAVGK----------------------------------------------SEQSKKLDIS 379
            |..:|..|:                                              |::.|:...:
  Fly   433 CLAINEAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFA 497

  Fly   380 FGPVFRQRPVSVEADLGATVSMRCDVAGNPEPEIEWISENSDQVVGVAAELKL---------KVS 435
            ..|:....|.:|.|..|...::.|...|:|.|.|.|| .|..|:|.:::.:::         .:.
  Fly   498 SAPIMELPPQNVTALDGKDATISCRAVGSPNPNITWI-YNETQLVDISSRVQILESGDLLISNIR 561

  Fly   436 SETAGRYFCKAVVNGFPEIGAEATLYVK------RAPIITSHKVQFGGVGGRVKIDCLAFSIPKA 494
            |..||.|.| ...|....:..||.|.|.      :.|:.|:..     :|....:.|...|.|..
  Fly   562 SVDAGLYIC-VRANEAGSVKGEAYLSVLVRTQIIQPPVDTTVL-----LGLTATLQCKVSSDPSV 620

  Fly   495 EH-ILWSFEGKIINMSSADPDIYIFEEHHLPEGVRA--ALIIRDSKATHFGKYNCTVMNSYGGDS 556
            .: |.|..||:     |:.|   |.....:  ||:|  .|.|:..:|:..|.|.| |:.|.||:.
  Fly   621 PYNIDWYREGQ-----SSTP---ISNSQRI--GVQADGQLEIQAVRASDVGSYAC-VVTSPGGNE 674

  Fly   557 L------VITLLREPGNIPV 570
            .      ||.|...|.|:.|
  Fly   675 TRAARLSVIELPFPPSNVKV 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 27/190 (14%)
IG_like 88..182 CDD:214653 26/176 (15%)
C2-set_2 189..279 CDD:285423 25/93 (27%)
Ig_2 307..379 CDD:290606 19/131 (15%)
I-set 382..462 CDD:254352 24/88 (27%)
IGc2 396..446 CDD:197706 16/58 (28%)
Ig 466..561 CDD:299845 28/103 (27%)
IG_like 478..561 CDD:214653 26/91 (29%)
sdkNP_001284756.1 Ig 71..157 CDD:299845 17/86 (20%)
I-set 72..150 CDD:254352 16/79 (20%)
Ig 172..245 CDD:299845 7/72 (10%)
IG_like 280..356 CDD:214653 25/84 (30%)
Ig 280..343 CDD:299845 22/71 (31%)
IG_like 375..450 CDD:214653 17/81 (21%)
Ig 378..447 CDD:143165 16/75 (21%)
Ig 506..587 CDD:299845 23/82 (28%)
IG_like 506..587 CDD:214653 23/82 (28%)
I-set 592..682 CDD:254352 26/105 (25%)
Ig 595..682 CDD:299845 26/102 (25%)
FN3 686..789 CDD:238020 3/9 (33%)
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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