DRSC/TRiP Functional Genomics Resources

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Protein Alignment kirre and syg-2

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001309674.1 Gene:syg-2 / 181561 WormBaseID:WBGene00007750 Length:1230 Species:Caenorhabditis elegans


Alignment Length:993 Identity:187/993 - (18%)
Similarity:318/993 - (32%) Gaps:320/993 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SSSSSSSSSGSSSAAASSANDE---SKPKGGDNGGQHF--AMEP---------QDQTAVVGSRVT 100
            |||:.|..|...|..|...|.|   :.|: |.:..||.  .:.|         :|:....|..|.
 Worm   388 SSSNVSVHSNELSVEAHQINVECMATNPE-GSSAKQHVIKIIAPPKAPIITGLEDRKFFEGDIVN 451

  Fly   101 LPC--------------RVMEK-----VGALQWTKDDFGLGQHRNLSGFERYSMVGSDEEGDFSL 146
            :.|              |..||     ...::|::.:   |.|..::||..||.:.         
 Worm   452 VTCEAQGGNPLAELSWYRGSEKHLVKGRKKMKWSQVN---GAHNEVAGFSSYSTLA--------- 504

  Fly   147 DIYPLMLD---DDAKYQCQVGPGPQGEQGIRSRFAKLTVLVPPEAPKITQGD-----YLVTTEDR 203
                |.:|   :..:.:|:.......|..|.|::  |:|..||....|...|     .||   .:
 Worm   505 ----LRVDRTMNTQRLKCEATNAALDEPLIESQY--LSVYYPPRRVLIRPADSGDQRLLV---GK 560

  Fly   204 EIELECVSQGGKPAAEITWIDGLGNVLTKGIEYVKEPLAD-SRRITAR-------SILKLAPKKE 260
            ...|.|.:....|||.|:|      ..::..:..|..|.| |...|.|       ::|...|.:|
 Worm   561 SARLVCGTLSSNPAAHISW------QFSRATDDNKVHLGDVSLNETTRDNGFNVENVLSFTPTEE 619

  Fly   261 HHNTTFTCQAQNTADRTYRSAKLLLEVKYAPKVI----VSVVGGALAGGKIPEGAEVILSCQADA 321
            :..|...|.|.:...:...:....|.|.|.||::    |:||        :.||.....:.....
 Worm   620 YDGTVVHCIANHPEWKHSVNTSFPLNVMYPPKMLVNDPVTVV--------MSEGDSFKENLTVRG 676

  Fly   322 NPHELSYRWFIN----DELMTGDFTTKMIIHNVSRQYHDA-IVKCEVVNAVGKSEQSKKLDISFG 381
            ||....::|..|    |..:...|....::........|| :......|:||.:..:.||.:.:.
 Worm   677 NPAISLWQWRKNGVPFDHTIGRVFARGAVLSGKQLLSTDAGVYTLTATNSVGSTNITIKLAVEYS 741

  Fly   382 PVFRQRPVSVEADLGATVSMRCDVAGNPEPE--IEWISENSDQVVG-----VAAELKLKVSSETA 439
            .........|.|..|.||.:.|:..|.|...  |.|. :|.:.:..     ..|.|:|..:.:.:
 Worm   742 ARITSISTPVIAATGDTVLLECEADGEPSKANMIHWY-KNGEILAAQHRGHKKAILRLNATEQQS 805

  Fly   440 GRYFCKA--------------VVNGFPEIGAEATLYVKRAPIITSHKVQFGGVGGRVKIDCLAFS 490
            |.|.|||              :||..|.: .....|.|.|.|:          ||..|..|..::
 Worm   806 GEYTCKADNGIGVPAEGQTFLLVNSAPRV-LPVARYAKTAGIL----------GGVAKARCKVYA 859

  Fly   491 IPKAEHILWSFEGKIINMSSA---------DPDIY---IFEEHHLPEGVRAALIIRDSKATHFGK 543
            :|..|.: |..:.::|..:|:         |...|   ::.::.:|:             .:..|
 Worm   860 VPTVEFV-WEKDEQLIKKNSSKYSIVNTQIDYSTYESTLWIKNIVPD-------------DYTKK 910

  Fly   544 YNCTVMNSYGGDSLVITLL-----REPGNIPVLLVVMGSMFCVAIILMIVMIIIVYRKRRSRKKP 603
            ..|...||:|.|.|.|.::     .||.|:.:....:.:            |.:.:.        
 Worm   911 VKCIARNSFGTDHLSIPIIPPTHPDEPFNLTMTNSTLNT------------ISVAWE-------- 955

  Fly   604 MPADVIPEASRGGDKLNELKSELRSKAYDVEYSEAGGDGL-AINLTQSPMPDVQMKGATLGVPLA 667
                  |....|.|::           ::|:|.....|.: .:|.|.:.:               
 Worm   956 ------PRFDGGSDQI-----------FEVKYRRQNDDLIHLVNTTHTNL--------------- 988

  Fly   668 GPVKFDERFSGDFGGDRYNRQCHIKNLKNQQETAYKGSPQANGYAHYFEYALDYSPPGGEGAAVV 732
                   |.||....:.|..|..              |..|.|:|..:...:.::....:|.   
 Worm   989 -------RLSGLATANTYFFQIR--------------SINARGFASSWTSPVIFATLNEDGV--- 1029

  Fly   733 VGSGGVGKLKNGGMNSAT-LPH---------------------------------SAAATVNGGG 763
                .|..::|..:...| :|:                                 .|...:|||.
 Worm  1030 ----NVAMIRNEKLKLTTWIPYILIFIVLFMLLNVVICCFVCNRTKKRKLREKTEMARTAINGGD 1090

  Fly   764 A----------GNGGGASLPRNQRHEIQQSQQS---------NGFLGQP----------LLQNGI 799
            .          ||.|.:....:.|.|:.:.:.|         ||:: ||          ||:...
 Worm  1091 VRQVQMYGTMMGNDGMSRRDIDDRPEMSEDEHSVRTMIEVSPNGYM-QPIEPMLYESTGLLEYDY 1154

  Fly   800 DSRFSAIYGNPYLRTNSSLLPPLPPPSTANPAATPAPPPYHAARHGHAHHANGG------LKHFV 858
            .:|   .|......|.|.....:|.|.       |..|.||:..:.....:|..      |..|:
 Worm  1155 QTR---SYMGSSQGTRSMTYANVPYPE-------PPQPSYHSNWNSLQRQSNNNTSPQHHLSTFI 1209

  Fly   859 GGAV-ITTSPVGNVNING 875
            ...: :...|:....::|
 Worm  1210 NPNMGVRAGPINYAQLDG 1227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 22/126 (17%)
IG_like 88..182 CDD:214653 22/124 (18%)
C2-set_2 189..279 CDD:285423 23/102 (23%)
Ig_2 307..379 CDD:290606 15/76 (20%)
I-set 382..462 CDD:254352 22/100 (22%)
IGc2 396..446 CDD:197706 15/56 (27%)
Ig 466..561 CDD:299845 21/106 (20%)
IG_like 478..561 CDD:214653 20/94 (21%)
syg-2NP_001309674.1 IG_like 25..105 CDD:214653
Ig 33..122 CDD:299845
Ig 147..228 CDD:299845
IGc2 248..313 CDD:197706
Ig 450..537 CDD:299845 19/104 (18%)
Ig 559..632 CDD:299845 19/78 (24%)
I-set 657..738 CDD:254352 18/88 (20%)
Ig 665..738 CDD:299845 14/72 (19%)
IG_like 748..828 CDD:214653 19/80 (24%)
IGc2 756..817 CDD:197706 17/61 (28%)
Ig 845..922 CDD:299845 18/100 (18%)
FN3 934..1023 CDD:238020 21/161 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 42 1.000 Domainoid score I8442
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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