DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kirre and syg-1

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001123159.1 Gene:syg-1 / 180555 WormBaseID:WBGene00006365 Length:730 Species:Caenorhabditis elegans


Alignment Length:713 Identity:190/713 - (26%)
Similarity:292/713 - (40%) Gaps:122/713 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 QHFAMEPQDQTAVVGSRVTLPCRVMEKVGALQWTKDDFGLGQHRN--LSGFERYSMVGSDEEGDF 144
            |.....|:|..|.||....|.|||..:.|.:||.|||||||..|:  |.|.:||.||||...|::
 Worm    23 QRIVEAPKDTLAAVGETAILTCRVEHQQGPVQWMKDDFGLGTDRDKPLPGNKRYRMVGSAANGEY 87

  Fly   145 SLDIYPLMLDDDAKYQCQVGPGPQGEQGIRSRFAKLTVLVPPEAPKITQGDY-LVTTEDREIELE 208
            :|:|..:.|.||..:.||:......:..:.|: |||||||.|..|||.:..: |.......|...
 Worm    88 NLEISNVTLFDDDDFACQISESDHAKAVVSSK-AKLTVLVRPTPPKIVKSHHSLKAIAGDPITQS 151

  Fly   209 CVSQGGKPAAEITW-----------IDGLGNVLTK--GIE------------YVKEPL------- 241
            |:|:.|||...|.|           :..||...:|  ||.            :|.|..       
 Worm   152 CLSRKGKPPPTIGWAIASDEHGKHIVSWLGESRSKFGGIHAKPEISQETVIAHVNETTQVEEGGN 216

  Fly   242 ---ADSRRITARSILKLAPKKEHHNTTFTCQAQN-TADRTYRSAKLLLEVKYAPKVIVSVVGGAL 302
               .||...:..|.|...|:.|..:....|.:|: |.........:.|.::|||::.::|     
 Worm   217 NSREDSSIYSIMSNLSFIPRPEDDHKYLICISQHMTFPNKIEVDSVKLSLRYAPQINLTV----- 276

  Fly   303 AGGKIP--EGAEVILSCQADANP-HELSYRWFINDELM--TGDFTTKMIIHNVSRQYHDAIVKCE 362
             ..|:|  |....:|:|..:|.| ..:...|:..::.:  |||..|   ...:..:.|:..:.||
 Worm   277 -ASKLPLRENGSALLACNVNAKPLDNVKISWYKGNQKLRETGDTLT---FETLKMEDHNRDIFCE 337

  Fly   363 VVNAVGKSEQSKKLDISFGPVFRQRPVSVEADLGATVSMRCDVAGNPEPEIEWISENSDQVVGVA 427
            ..|.:|.:..|.||:::||..........|.:.|......|....||.|.|.|...:||:::|..
 Worm   338 ATNEIGTTRGSIKLNVAFGARIMSTSQDKEVNEGDNAFFHCATLANPAPAIFWTRGDSDEIIGHG 402

  Fly   428 AELKLK-VSSETAGRYFCKAVVNGFPEIGAEATLYVKRAPIITSHKVQFGGVGGRVKIDCLAFSI 491
            ..|.|: |.:...|.|.|.|.|.||.:......|:::..|.::........:....:|.|.....
 Worm   403 ENLTLENVRTWQQGNYNCTATVEGFRKQILSHYLHIRGPPTVSMKDEVSASLDEATEIICEISGR 467

  Fly   492 PKAEHILWSFEGKIINMSSADPDIYIFEEHHLPEGVRAALIIRDSKATHFGKYNCTVMNSYGGDS 556
            ||..::.|:..||.||.::....::   ::..|.|..:.|.|:|.|...||.|||:..|..|.|:
 Worm   468 PKTNNVRWTVNGKEINFNNGRITVH---QYPKPYGKESILKIKDLKEEDFGVYNCSANNGLGFDN 529

  Fly   557 -------------LVITLLREPGNIPVLLVVMGSMFCVAIILMIVMIIIVYRKRRSRKKPMPADV 608
                         :|||...:  .:..|.::...:..|:::..:.|.....|.|:|:.....:||
 Worm   530 RGTLLKKRNILDWIVITAKFD--RMVALAIISAGVLLVSLLCCLCMCRSNCRSRKSKFIDDQSDV 592

  Fly   609 IPEASRGGDKLNELKSELRSKAYDVE-YSEAGGDGL------AINLTQSPMPDVQMKGATLGVPL 666
                        .:|.|.....|..| ||.:..|.:      .|::.|: .||:...|||     
 Worm   593 ------------TVKCEALDGQYFPEMYSSSPVDNVHLSTKDYISIPQN-NPDLDFLGAT----- 639

  Fly   667 AGPVKFDERFSGDFG--GDRYNRQCHIKNLKNQQETAYKGSPQANGYAH-YFEYALDYSPPGG 726
                       |.||  |..|.: | ..|..|  |..|      |.|.| |..:....|.|||
 Worm   640 -----------GSFGPPGGLYPK-C-FNNSAN--EYIY------NRYEHSYGSFGSGLSTPGG 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 41/97 (42%)
IG_like 88..182 CDD:214653 40/95 (42%)
C2-set_2 189..279 CDD:285423 28/126 (22%)
Ig_2 307..379 CDD:290606 19/76 (25%)
I-set 382..462 CDD:254352 22/80 (28%)
IGc2 396..446 CDD:197706 16/50 (32%)
Ig 466..561 CDD:299845 26/107 (24%)
IG_like 478..561 CDD:214653 25/95 (26%)
syg-1NP_001123159.1 I-set 24..124 CDD:254352 40/100 (40%)
Ig 30..124 CDD:299845 39/94 (41%)
Ig <151..265 CDD:299845 23/113 (20%)
Ig_2 276..353 CDD:290606 21/85 (25%)
IG_like 283..353 CDD:214653 18/72 (25%)
IG_like 363..427 CDD:214653 19/63 (30%)
Ig_2 368..438 CDD:290606 21/69 (30%)
Ig 440..528 CDD:299845 23/90 (26%)
IG_like 450..535 CDD:214653 23/87 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163994
Domainoid 1 1.000 83 1.000 Domainoid score I5340
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H136566
Inparanoid 1 1.050 203 1.000 Inparanoid score I2452
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 1 1.000 - - FOG0001084
OrthoInspector 1 1.000 - - otm14417
orthoMCL 1 0.900 - - OOG6_103358
Panther 1 1.100 - - O PTHR11640
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3009
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.930

Return to query results.
Submit another query.