DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kirre and Ncam2

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001106679.1 Gene:Ncam2 / 17968 MGIID:97282 Length:837 Species:Mus musculus


Alignment Length:728 Identity:146/728 - (20%)
Similarity:250/728 - (34%) Gaps:220/728 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 IRSRFAKLTVLVPPEAPKITQGDYLVTTEDREIELECVSQGGKPAAEITWIDGLGN--VLTKGIE 235
            :||..|.|.|.:.....:::.|:....|        |.:. |:|.: |.|.:..|.  :.|:.:.
Mouse    14 VRSGQALLQVTISLSKVELSVGESKFFT--------CTAI-GEPES-IDWYNPQGEKIISTQRVM 68

  Fly   236 YVKEPLADSRRITARSILKLAPKKEHHNTTFTCQAQNTADRTYRSAKLLLEV--KYAPKVIVSVV 298
            ..||.:        ||.|.:..........:.|||.:...:| :.|.::||:  |...:.:||. 
Mouse    69 LQKEGV--------RSRLTIYNANIEDAGIYRCQATDAKGQT-QEATVVLEIYQKLTFREVVSP- 123

  Fly   299 GGALAGGKIPEGAEVILSCQADANPHELSYRWFINDELMT----GDF----TTKMIIHNVSRQYH 355
                ...|..|.|||:  |:..::|.. :..|..::|.:|    ..|    ...:.|.|:::. .
Mouse   124 ----QEFKQGEDAEVV--CRVSSSPAP-AVSWLYHNEEVTTIPDNRFAVLANNNLQILNINKS-D 180

  Fly   356 DAIVKCEVVNAVGKSEQSKKLD-------ISFGP--VFRQRPVSVEADLGATVSMRCDVAGNPEP 411
            :.|.:||     |:.|...::|       ::..|  :..|:..:..|:.|..:::.|..:|:|:|
Mouse   181 EGIYRCE-----GRVEARGEIDFRDIIVIVNVPPAIMMPQKSFNATAERGEEMTLTCKASGSPDP 240

  Fly   412 EIEW------ISENSDQVV-GVAAELKLK-VSSETAGRYFCKAVVNGFPEIGAEATLYVKRAPII 468
            .|.|      |.||...:: |...||.:: :.::..|.|.||| .|...|...:|.|.|...|.|
Mouse   241 TISWFRNGKLIEENEKYILKGSNTELTVRNIINKDGGSYVCKA-TNKAGEDQKQAFLQVFVQPHI 304

  Fly   469 TSHKVQFGGVGGRVKIDCLAFSIPKAEHILW--SFEGKIINMSSADPD--IYIFEEHHLPEGVRA 529
            ...|.:.....|.|.:.|.|...|..| |.|  :.:|.:.:.....||  |.:..:|.     |:
Mouse   305 LQLKNETTSENGHVTLVCEAEGEPVPE-ITWKRAIDGVMFSEGDKSPDGRIEVKGQHG-----RS 363

  Fly   530 ALIIRDSKATHFGKYNCTVMNSYGGDSLVITLLREPGNIPVLLVVMGSMFCVAIILMIVMIIIVY 594
            :|.|||.|.:..|:|:|...:..||..                                      
Mouse   364 SLHIRDVKLSDSGRYDCEAASRIGGHQ-------------------------------------- 390

  Fly   595 RKRRSRKKPMPADVIPEASRGGDKLNELKSELRSKAYDVEYS-------------EAGGDGLAIN 646
                                            ||...|:||:             |.....::.:
Mouse   391 --------------------------------RSMHLDIEYAPKFVSNQTMYYSWEGNPINISCD 423

  Fly   647 LTQSPMPDVQMKGATLGVPLAGPVKFDERFSG-------------DFGGDRYNRQC--------- 689
            :|.:|...:..:...|.:|............|             |||  |||  |         
Mouse   424 VTANPPASIHWRREKLLLPAKNTTHLKTHSVGRKMILEIAPTSDNDFG--RYN--CTATNRIGTR 484

  Fly   690 ---------------H-IKNLKNQQETA--YKGSPQANGYAHYFEYALDYSPPGGEGAAVVVGSG 736
                           | :|.::..|.||  ....|:::|......|.:|......|...:|...|
Mouse   485 FQEYILELADVPSSPHGVKIIELSQTTAKISFNKPESHGGVPIHHYQVDVKEVASETWKIVRSHG 549

  Fly   737 GVGKLKNGGMNSATLPHSAAATVNGGGAGNGGG----ASLP--------------RNQRHEIQQS 783
            ....:....:...|......|.|||.|.|:...    .:||              ..:..:|..:
Mouse   550 VQTMVVLSSLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKISIT 614

  Fly   784 QQSNGFLGQPLLQ 796
            :|.:|  |.|:|:
Mouse   615 KQDDG--GAPILE 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 4/9 (44%)
IG_like 88..182 CDD:214653 4/8 (50%)
C2-set_2 189..279 CDD:285423 18/91 (20%)
Ig_2 307..379 CDD:290606 18/86 (21%)
I-set 382..462 CDD:254352 25/89 (28%)
IGc2 396..446 CDD:197706 16/57 (28%)
Ig 466..561 CDD:299845 27/98 (28%)
IG_like 478..561 CDD:214653 24/86 (28%)
Ncam2NP_001106679.1 Ig1_NCAM-2 21..112 CDD:143274 23/109 (21%)
I-set 22..111 CDD:254352 21/107 (20%)
I-set 117..193 CDD:254352 20/89 (22%)
IGc2 128..189 CDD:197706 15/69 (22%)
Ig 208..301 CDD:299845 26/93 (28%)
I-set 215..298 CDD:254352 24/83 (29%)
Ig 300..397 CDD:299845 29/172 (17%)
IG_like 308..395 CDD:214653 27/162 (17%)
IG_like 413..491 CDD:214653 13/81 (16%)
IGc2 414..482 CDD:197706 13/71 (18%)
FN3 496..588 CDD:238020 19/91 (21%)
fn3 594..678 CDD:278470 6/34 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 764..810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.