DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kirre and Ncam1

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_006510118.1 Gene:Ncam1 / 17967 MGIID:97281 Length:1162 Species:Mus musculus


Alignment Length:1110 Identity:221/1110 - (19%)
Similarity:352/1110 - (31%) Gaps:383/1110 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VGSRVTLPCRVMEKVGALQWTKDDF------GLGQHRNLSGF-----------ERYSMVGSDEEG 142
            :|:.|:|...::...|.:...:..|      |..:.:::|.|           :|.|:|.:|::.
Mouse    14 LGTAVSLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDS 78

  Fly   143 DFSLDIYPLMLDDDAKYQCQV--GPGPQGEQGIRSR-FAKLTVLVPPEAPKITQGDYLVTTEDRE 204
            . :|.||...:||...|:|.|  ..|.|.|..:..: |.||.....|...:..:|      ||..
Mouse    79 S-TLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEG------EDAV 136

  Fly   205 IELECVSQGGKPAAEITWIDGLGNVLTKGIEYVKEPLADSRRITARSILKLAPKKEHHNTTFTCQ 269
            |..:.||  ..|...|....|...:|.|.:.::         :.:.:.|::...|:....|:.|:
Mouse   137 IVCDVVS--SLPPTIIWKHKGRDVILKKDVRFI---------VLSNNYLQIRGIKKTDEGTYRCE 190

  Fly   270 AQNTA--DRTYRSAKLLLEVKYAPKVIVSVVGGALAGGKIPEGAEVILSCQADANPHELSYRWFI 332
            .:..|  :..::..::::.|....:...|:|......|:     .|.|.|.||..| |.:..|..
Mouse   191 GRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQ-----SVTLVCDADGFP-EPTMSWTK 249

  Fly   333 NDELMT-----------GDFTTKMIIHNVSRQYHDAIVKCEVVNAVGKSEQSKKLDISFGPVFRQ 386
            :.|.:.           .|.::::.|.||.:. .:|...|...|..|:.:.|..|.:...|....
Mouse   250 DGEPIENEEEDDEKHIFSDDSSELTIRNVDKN-DEAEYVCIAENKAGEQDASIHLKVFAKPKITY 313

  Fly   387 RPVSVEADLGATVSMRCDVAGNPEPEIEW------IS----------ENSDQVVG-VAAELKLKV 434
            .......:|...|::.|:.:|:|.|.|.|      ||          |..:.:.| :......:|
Mouse   314 VENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRPEKQETLDGHMVVRSHARV 378

  Fly   435 SSET--------AGRYFCKAVVNGFPEIGAEATLYVKRAPIITSHKVQFGGVGGRVKIDCLAFSI 491
            ||.|        ||.|.|.| .|...:......|.|:.||.:......:...|.:|.|.|..|:.
Mouse   379 SSLTLKSIQYTDAGEYICTA-SNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFAY 442

  Fly   492 PKAEHILWSFEGKIINMSSADPDIYIFEEHHLPEGVRAALIIRDSKATHFGKYNCTVMNSYGGDS 556
            |.|. |.|..:|::: .||...:|.|:   :.|..  :.|.:.......||.||||.:|..|.:|
Mouse   443 PSAT-ISWFRDGQLL-PSSNYSNIKIY---NTPSA--SYLEVTPDSENDFGNYNCTAVNRIGQES 500

  Fly   557 LVITLLR------------------------EP---GNIPVLLVVMGSMFCVAIILMIVMIIIVY 594
            |...|::                        ||   |.:|:|                       
Mouse   501 LEFILVQADTPSSPSIDRVEPYSSTAQVQFDEPEATGGVPIL----------------------- 542

  Fly   595 RKRRSRKKPMPADV-------IPEASRGG-DKLNELKSELRSKAYDVEYSEAGGDGLA------- 644
             |.::..|.:..:.       ..||:..| ..:..||.|.|   |.|..:...|.||.       
Mouse   543 -KYKAEWKSLGEESWHFKWYDAKEANMEGIVTIMGLKPETR---YSVRLAALNGKGLGEISAATE 603

  Fly   645 --INLTQSPMPDVQMKGATLGVPLAG-------PV----------KFDERFSGDFGGDRYNRQCH 690
              .....||.|......:|| |||:.       ||          ....:..|..|.|..:    
Mouse   604 FKTQPVHSPPPLAPANSSTL-VPLSPRATTWPLPVLPTTDLSKGEPSAPKLEGQMGEDGNS---- 663

  Fly   691 IK-NLKNQQETAYKGSPQANGYAHYF-----EYALDYSP----PGG-------------EGAAVV 732
            || ||..|.:   .|||    ..||.     :.|.::.|    |.|             |....|
Mouse   664 IKVNLIKQDD---GGSP----IRHYLVKYRAKLASEWKPEIRLPSGSDHVMLKSLDWNAEYEVYV 721

  Fly   733 VGSGGVGKLKNGGMNSATLPHSAAATVNG------------------------------------ 761
            |.....||.|.......|.....|...||                                    
Mouse   722 VAENQQGKSKAAHFVFRTSAQPTAIPANGSPTAGLSTGAIVGILIVIFVLLLVVMDITCYFLNKC 786

  Fly   762 -----------GGAGNG--------GGASLPRNQ--------RHEIQQSQQSNGF---------- 789
                       |.||.|        |.|:..:::        |.|.:::...:|.          
Mouse   787 GLLMCIAVNLCGKAGPGAKGKDMEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTP 851

  Fly   790 LGQPLL---------------------QNGIDSRFSAIYGNPYLRTNSSLLPPLPPPSTANPAAT 833
            |.:|.|                     .:.|...|:....:|...| ::|...:.||:|..|.:.
Mouse   852 LTEPELPADTTATVEDMLPSVTTVTTNSDTITETFATAQNSPTSET-TTLTSSIAPPATTVPDSN 915

  Fly   834 PAPPPYHAARHGHAHHANGGLKHFVGGAVITTSPVGNVNINGGGGGGSTPSGGGGVGVGVAAGGS 898
            ..|                                         .|.:|||.|            
Mouse   916 SVP-----------------------------------------AGQATPSKG------------ 927

  Fly   899 VSGSSSNLTASSNTLAATPLAGGGVGNSGQCAQSPS----GQFILSNNG----------KGHTQK 949
                   :||||::.|:.|.....|..|.....:||    ...:|:|.|          .|.|.|
Mouse   928 -------VTASSSSPASAPKVAPLVDLSDTPTSAPSASNLSSTVLANQGAVLSPSTPASAGETSK 985

  Fly   950 GPLAT 954
            .|.|:
Mouse   986 APPAS 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 26/107 (24%)
IG_like 88..182 CDD:214653 26/106 (25%)
C2-set_2 189..279 CDD:285423 16/91 (18%)
Ig_2 307..379 CDD:290606 19/82 (23%)
I-set 382..462 CDD:254352 24/104 (23%)
IGc2 396..446 CDD:197706 19/74 (26%)
Ig 466..561 CDD:299845 27/94 (29%)
IG_like 478..561 CDD:214653 26/82 (32%)
Ncam1XP_006510118.1 Ig1_NCAM-1 20..115 CDD:143273 21/95 (22%)
IG 124..190 CDD:214652 15/82 (18%)
Ig3_NCAM-1_like 211..308 CDD:143207 22/103 (21%)
Ig_NCAM-1 307..413 CDD:143277 24/106 (23%)
Ig_3 417..494 CDD:372822 23/83 (28%)
FN3 509..606 CDD:238020 19/123 (15%)
fn3 649..731 CDD:365830 22/92 (24%)
PHA03247 <905..1140 CDD:223021 28/146 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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