DRSC/TRiP Functional Genomics Resources

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Protein Alignment kirre and rig-4

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_501339.2 Gene:rig-4 / 177597 WormBaseID:WBGene00004371 Length:2325 Species:Caenorhabditis elegans


Alignment Length:606 Identity:106/606 - (17%)
Similarity:201/606 - (33%) Gaps:203/606 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 KPKGGDNGGQHFAMEPQDQTAVVGSRVTLPCRVMEKVGALQWTKDDFGLGQHRNLSGFERYSMVG 137
            ||....:||     ..:.:.||.|..:.|.|             ||..|.        |:|....
 Worm    27 KPPIFQDGG-----SVEQKVAVEGEIIRLKC-------------DDAELA--------EQYEWRI 65

  Fly   138 SDEEGDF-----SLDIYPLMLDDDAKYQCQVGPGPQGEQGIRSRFAKLTVLVPPEAPKITQGDYL 197
            .|..|:.     ..::....::|:.||:|               .|:.||......|.:.:..||
 Worm    66 GDASGELIATSKFCEVQASRVNDEKKYRC---------------VARNTVGAAISPPSMVRSKYL 115

  Fly   198 --VTTEDREIELECVSQGGK------------------------PAAEIT-----WIDGLGNVLT 231
              ....|..::.|..:..|:                        .:.::|     ::...||::.
 Worm   116 DDFDASDESVQYEVTTGVGRYFVLRRPTLLASRNLDISYSWIKDDSHQVTPDATHFVTSDGNLVV 180

  Fly   232 KGIEYVKEPLADSRRITARSILKLAPKKEHH--NTTFTCQAQNTADRTYRSAKLLLEVKYAP--K 292
            .|::  ::.....:.:.:...||....||::  :...:...|||           |.:.|.|  :
 Worm   181 TGVK--RDDFGAYKLMASSDDLKEIVSKEYNVRDNGLSPSLQNT-----------LSIVYFPTDR 232

  Fly   293 VIVSVVGGALAGGKIPEGAEVILSCQAD-ANPHELSYRWFINDELMTGD---FTT-----KMIIH 348
            .|:.        ..:|.  :.|..|... .:..::..|||:|.:.::|.   .||     ::||.
 Worm   233 TIIE--------STLPH--DEIFDCVTSFGSKDDVRIRWFLNGQQISGSEVGMTTTLNNRRLIIS 287

  Fly   349 NVS---RQYHDAIVKCEVVNAVGKSEQSKKLDISF--GPVFRQRPVSVEADLGATVSMRCDVAGN 408
            |.|   |..|.  ::|....|:|::...|...::|  .|:.:..|..::..:|:::|::|.|...
 Worm   288 NPSSFTRGEHK--LECRADAAMGRTSDQKSAYMTFISRPILKDLPNEIQKTVGSSLSLKCSVKKK 350

  Fly   409 PEPEIEWISENSDQVVGVAAELKL-KVSSETAGRYFCKAVVNGFPEIGAE-ATLYVKRAP----- 466
            ...:|:|. :|...:.....:|.: ::..:..|.|.|:|.    ...||: |:::||...     
 Worm   351 SSMDIKWY-KNGLMMTTQRGKLTIDRIKQDDFGLYQCEAT----NAAGADLASVWVKEGEANETV 410

  Fly   467 --------------------------------------------------IITSHKVQFGGVGGR 481
                                                              |.|...:.......|
 Worm   411 ATEMSEDGMSLEEEISMETPPPRKLKFFDNSKSQEQLFPFTSELEPSQKLIKTPKDLTVASGTDR 475

  Fly   482 VKIDCLAFSIPKAEHILWSFEGKIINMSSADPDIYIFEEHHLPEGVRAALIIRDSKATHFGKYNC 546
            :.::|.|...| ..:|:|...|..|...:...|:           ....|.|.|.:.:..|:|.|
 Worm   476 IMMECAATGSP-PPNIIWLLNGHEIQTDNVKYDL-----------TNDGLAIHDIRKSDEGEYTC 528

  Fly   547 TVMNS---------YGGDSLV 558
            .:..|         ..||||:
 Worm   529 EISGSNVKATANVQVNGDSLI 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 18/100 (18%)
IG_like 88..182 CDD:214653 17/98 (17%)
C2-set_2 189..279 CDD:285423 17/122 (14%)
Ig_2 307..379 CDD:290606 20/83 (24%)
I-set 382..462 CDD:254352 17/81 (21%)
IGc2 396..446 CDD:197706 11/50 (22%)
Ig 466..561 CDD:299845 22/157 (14%)
IG_like 478..561 CDD:214653 20/90 (22%)
rig-4NP_501339.2 IG_like 330..402 CDD:214653 16/76 (21%)
IGc2 338..393 CDD:197706 12/59 (20%)
I-set 459..543 CDD:254352 18/95 (19%)
IGc2 478..534 CDD:197706 14/67 (21%)
IG_like 553..639 CDD:214653
Ig 564..635 CDD:143165
FN3 643..747 CDD:238020
FN3 756..850 CDD:238020
FN3 858..954 CDD:238020
FN3 959..1042 CDD:238020
FN3 1057..1151 CDD:238020
FN3 1156..1251 CDD:238020
FN3 1258..1356 CDD:238020
FN3 1361..1453 CDD:238020
FN3 1464..1560 CDD:238020
FN3 1572..1664 CDD:238020
FN3 1679..1764 CDD:238020
FN3 1774..1858 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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