DRSC/TRiP Functional Genomics Resources

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Protein Alignment kirre and lad-2

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001023496.1 Gene:lad-2 / 177078 WormBaseID:WBGene00002243 Length:1187 Species:Caenorhabditis elegans


Alignment Length:536 Identity:113/536 - (21%)
Similarity:186/536 - (34%) Gaps:170/536 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ANDESKPKGGDNGGQHFAMEPQDQTAVVGSRVTLPCRVMEK-VGALQWTKDDFGLGQHR--NLSG 129
            :.|:|.|.      :..::.|.:.|...|.::.|.|....: :..:.|:|.|..|.:.|  :|  
 Worm   230 SQDKSHPV------KKMSVSPSEVTVRAGGQLKLQCIFGGRPLPTIFWSKIDGELPKSRIKDL-- 286

  Fly   130 FERYSMVGSDEEGDF--SLDIYPLMLDDDAKYQCQVGPGPQGEQGIRSRFAKLTVLVPPEAPKIT 192
                    :..|.||  ||.:..:..||...|:|            |.|....||.|...|....
 Worm   287 --------TSHESDFGRSLIVENVHPDDAGAYEC------------RGRHLVHTVNVRVMAAPFW 331

  Fly   193 QGD---YLVTTEDREIELECVSQGGKPAAEITW-IDGLGNVLTKGIEYVKEPLADSRRITARSIL 253
            :.|   .:...|:...||||:: ||:|...||| ::|         :::.|...||||:......
 Worm   332 EFDPPRDISLPEESTGELECLA-GGQPTPIITWSMNG---------KFLHELAEDSRRVLLDHGR 386

  Fly   254 KLAPKKEHHNT---TFTCQAQNTADRTYRSAKLLLEVK-YAP----------KVIVSVVGGALAG 304
            .|..:..:|:.   .:.|.|.|...  |..|...:.|: :||          ||::.        
 Worm   387 ILRVRNLNHDLDTGVYQCNASNPLG--YVFANAFVHVRAHAPFFRMPAARHWKVVLH-------- 441

  Fly   305 GKIPEGAEVILSCQADANPHELSYRWFINDE--LMTGDFTTKMIIHNVSRQY-----HDAIVKCE 362
                  :.|:|.|..||.| |...||...|:  |...:...|:..::....|     .:.:..|.
 Worm   442 ------STVVLDCDVDAAP-EAMVRWVDADDRPLQVVEGKNKLFPNHTFMVYDVNSADEGLYYCN 499

  Fly   363 VVNAVGKSEQSKKLDISFGPVFRQR---PVSVEADLGATVSMRCDVAGNPEPEI--EWISENSDQ 422
            |.|..|.:..:.:|.: |.|.:..|   |..:..:.|.|..:.|:...:|...|  :|       
 Worm   500 VSNKYGINRATNRLQV-FKPTYFVRIPTPKRLILEAGETAEVFCEAVADPRLPIRYQW------- 556

  Fly   423 VVGVAAELKLKVSSETAGRYFCKAVVNGFPEIGAEATLYVKRAPIITSHKVQFGGVGGRVK--ID 485
                                    .:||  ::..|:..|.     |...:::|..|.||..  ||
 Worm   557 ------------------------TING--KVLTESQYYE-----ILPDRLRFRSVRGRHSGIID 590

  Fly   486 CLAFSIPKAEHILWSFEGKIINMSSADPDIYIFEEHHLPEGVRAALIIRDSKA------THFGKY 544
            |.|.:                     |.|:.:         ....||::|..|      .|..:.
 Worm   591 CAAIT---------------------DVDVKL---------ASMQLIVKDVPAHPVVETAHCSER 625

  Fly   545 NCT---VMNSYGGDSL 557
            ..|   |..|..|||:
 Worm   626 KATVKWVAASDHGDSI 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 23/100 (23%)
IG_like 88..182 CDD:214653 22/98 (22%)
C2-set_2 189..279 CDD:285423 23/96 (24%)
Ig_2 307..379 CDD:290606 18/78 (23%)
I-set 382..462 CDD:254352 12/84 (14%)
IGc2 396..446 CDD:197706 6/51 (12%)
Ig 466..561 CDD:299845 22/103 (21%)
IG_like 478..561 CDD:214653 20/91 (22%)
lad-2NP_001023496.1 IG_like 48..116 CDD:214653
Ig 49..121 CDD:299845
Ig 124..214 CDD:299845
IG_like 244..325 CDD:214653 25/102 (25%)
Ig 255..325 CDD:299845 22/91 (24%)
I-set 335..421 CDD:254352 24/97 (25%)
Ig4_L1-NrCAM_like 344..422 CDD:143179 23/89 (26%)
IG_like 438..515 CDD:214653 19/91 (21%)
Ig 443..516 CDD:299845 18/74 (24%)
IG_like 527..608 CDD:214653 23/148 (16%)
Ig 535..>593 CDD:299845 18/95 (19%)
FN3 610..697 CDD:238020 9/32 (28%)
FN3 721..804 CDD:238020
fn3 823..909 CDD:278470
FN3 921..1010 CDD:238020
FN3 1016..1108 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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