DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kirre and Dscam

DIOPT Version :9

Sequence 1:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_006522949.1 Gene:Dscam / 13508 MGIID:1196281 Length:2034 Species:Mus musculus


Alignment Length:686 Identity:141/686 - (20%)
Similarity:230/686 - (33%) Gaps:202/686 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PIAVHAKSKKNKSS---QSSHHGDSSSSSSSSSSSSGSSSAAASSANDESKPKGGDNGGQHFAME 87
            |:.:..:.:|..:.   ::|...||.|.....|:..|::...                |:.:..:
Mouse   264 PLELSGRFQKTVTGLLIENSRPSDSGSYVCEVSNRYGTAKVI----------------GRLYVKQ 312

  Fly    88 PQDQT-------AVVGSRVTLPCRVM-EKVGALQWTKDD--FGLGQHRNLSGFERYSMVGSDEEG 142
            |...|       :.|||:|:|.|.|. .:...|.|.::.  ...|::..::|....:::      
Mouse   313 PLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLI------ 371

  Fly   143 DFSLDIYPLMLDDDAKYQCQVGPGPQGEQGIRSRFAKLTVLVPPEAPKITQG-DYLVTTEDREIE 206
               :|  .::..|...|||.|.......|..      :.|::....|||... ...|.:....:.
Mouse   372 ---MD--HMVKSDGGAYQCFVRKDKLSAQDY------VQVVLEDGTPKIISAFSEKVVSPAEPVS 425

  Fly   207 LECVSQGGKPAAEITW-------IDGLGNVLTKGIEYVKEPLADSRRITAR----SILKLAPKKE 260
            |.| :..|.|...:||       :.|.|:.:             |:.||:.    |.|.::..:.
Mouse   426 LVC-NVKGTPLPTVTWTLDDDPILKGSGHRI-------------SQMITSEGNVVSYLNISSSQV 476

  Fly   261 HHNTTFTCQAQNTAD--------------------------------------------RTYRSA 281
            .....:.|.|.|:|.                                            :.|::|
Mouse   477 RDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNA 541

  Fly   282 KLLL------------------------EVKYAPKVIV----SVVGGALAGGKIPE--------- 309
            .||.                        |.:|...|:|    |.........|:|.         
Mouse   542 NLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPR 606

  Fly   310 ---GAEVILSC-------------QADANPHELSYRWFINDELMTGDFTTKMIIHNVSRQYHDAI 358
               |..|.:.|             |.|..|...|....|::.    |||:.:.|.|:|.. |:..
Mouse   607 FSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNI----DFTSSLRISNLSLM-HNGN 666

  Fly   359 VKCEVVNAVGKSEQSKKLDISFGPVFRQRPVSVEADLGATVSMRCDVAGNPEPEIEW-------- 415
            ..|...|.....|...:|.:...|.|..:|...:...|..|.:.|...|.|.|.|.|        
Mouse   667 YTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGV 731

  Fly   416 -----ISENSD-QVVGVAAELKLKVSSETAGRYFCKAVVNGFPEIGAEAT----LYVKRAPIITS 470
                 |:.|.. ||:...:.|...|..|.:|.|.|| |.|   ::||:.:    |.||...:|||
Mouse   732 PQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCK-VSN---DVGADVSKSMYLTVKIPAMITS 792

  Fly   471 H-KVQFGGVGGRVKIDCLAFSIPKAEHILWSFEGKIINMSSADPDIYIFEEHHLPEGVRAALIIR 534
            : .......|.|.::.|.|.. .|...:.|..|.:|||...|.   |:.....:.|.|.:.|.|.
Mouse   793 YPNTTLATQGQRKEMSCTAHG-EKPIIVRWEKEDRIINPEMAR---YLVSTKEVGEEVISTLQIL 853

  Fly   535 DSKATHFGKYNCTVMNSYGGDSLVITL-LREPGNIP 569
            .:.....|.::|..:||||.|..:|.| ::||.:.|
Mouse   854 PTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPP 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirreNP_001245505.1 Ig 87..183 CDD:299845 20/105 (19%)
IG_like 88..182 CDD:214653 20/103 (19%)
C2-set_2 189..279 CDD:285423 21/145 (14%)
Ig_2 307..379 CDD:290606 20/96 (21%)
I-set 382..462 CDD:254352 27/97 (28%)
IGc2 396..446 CDD:197706 18/63 (29%)
Ig 466..561 CDD:299845 27/95 (28%)
IG_like 478..561 CDD:214653 24/82 (29%)
DscamXP_006522949.1 Ig 15..115 CDD:386229
IGc2 239..300 CDD:197706 7/35 (20%)
IG 320..400 CDD:214652 18/96 (19%)
Ig_3 410..488 CDD:372822 16/91 (18%)
IGc2 518..575 CDD:197706 6/56 (11%)
Ig 596..686 CDD:386229 20/94 (21%)
Ig_DSCAM 707..784 CDD:143211 23/80 (29%)
Ig 802..889 CDD:386229 27/90 (30%)
FN3 885..978 CDD:238020 2/5 (40%)
FN3 986..1083 CDD:238020
FN3 1091..1184 CDD:238020
FN3 1189..1278 CDD:238020
Ig_3 1301..1363 CDD:372822
FN3 1380..1470 CDD:238020
FN3 1486..1555 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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