DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rst and Igsf9

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001139272.1 Gene:Igsf9 / 93842 MGIID:2135283 Length:1179 Species:Mus musculus


Alignment Length:840 Identity:164/840 - (19%)
Similarity:263/840 - (31%) Gaps:267/840 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLHTMQLLLLATIVGMVRSSPYTSYQNQRFAMEPQDQTAV--VGARVTLPCRVINKQG-----TL 58
            |:..::|.:|:.|:.          |......:|:..:.|  .|....|.|.::...|     .:
Mouse     1 MIWCLRLTVLSLIIS----------QGADGRRKPEVVSVVGRAGESAVLGCDLLPPAGHPPLHVI 55

  Fly    59 QWTKDDFGLGTSRDLSGFERYAMVGSDEEGDY----------SLDIYPVMLDDDARYQCQV---- 109
            :|.:..|.|..      |.::.:.....:.||          ||.|..:.::|...|:|:|    
Mouse    56 EWLRFGFLLPI------FIQFGLYSPRIDPDYVGRVRLQTGASLQIEGLRVEDQGWYECRVLFLD 114

  Fly   110 SPGPEGQPAIRSTFAGLTVLVPP---EAPKITQGDVIYATEDRKVEIECVSVGGKPAAEITWI-- 169
            ...|| |.....::..|||..||   |.|.:    |:...|...|.:.||: .|.|...:||.  
Mouse   115 QHSPE-QDFANGSWVHLTVNSPPQFQETPPL----VLEVKELEAVTLRCVA-RGSPQPYVTWKFR 173

  Fly   170 -----DGLGNVLTDNIEYTVIPLPDQRRFTAKSVLRLTPKKEHHNTNFSCQAQNTADRTYRSAKI 229
                 .|.|.|...|....:      ||....|.           .:::|||.::......:.::
Mouse   174 GQDLGKGQGQVQVQNGTLWI------RRVERGSA-----------GDYTCQASSSEGSITHATQL 221

  Fly   230 RVEVKYAPKVKVNVMGSLPGGAGGSVGGAGGGSVHMSTGSRIVEHSQVRLECRADANPSDVRYRW 294
            .|   ..|.|.|     :|                 .:.|.:.....|.|.|||:|.|:::.|.|
Mouse   222 LV---LGPPVIV-----VP-----------------PSNSTVNSSQDVSLACRAEAYPANLTYSW 261

  Fly   295 FINDEPIIGGQKTEMVIR---------NVTRKFHDAIVKCEVQNS-VGKSEDSETLDISYAPSFR 349
            |.:...:....:.:..:|         ..|:........|...|. :.....|..|.:.|.....
Mouse   262 FQDGVNVFHISRLQSRVRILVDGSLWLQATQPDDAGHYTCVPSNGFLHPPSASAYLTVLYPAQVT 326

  Fly   350 QRPQSMEADVGSVVSLTCEVDSNPQPEIV-WIQHPS----DRVVGTST----NLTFSVSNETA-G 404
            ..|.......|....:.|.|.:||....| |.:...    |:..|.|.    :|..::.||.| |
Mouse   327 VMPPETPLPTGMRGVIRCPVRANPPLLFVTWTKDGQALQLDKFPGWSLGPEGSLIIALGNENALG 391

  Fly   405 RYYCKA-NVPGYAEISADAYVYLKGSPAIGSQRTQ--YGLVGDTARIECFASSVPRARHVSWTFN 466
            .|.|.. |..|.|..|....|.||..||...|..:  :..||....|.|.|...| ...|||...
Mouse   392 EYSCTPYNSLGTAGPSPVTQVLLKAPPAFIDQPKEEYFQEVGRELLIPCSARGDP-PPIVSWAKV 455

  Fly   467 GQEISSESGHDYSILVDAVPGGVKSTLIIRDSQAYHYGKYNCTVVNDYGNDVAEIQLQAKKSVSL 531
            |:.:..::..|.:           ::|::|.......|::.|:..|      |..::....:|.:
Mouse   456 GRGLQGQAQVDSN-----------NSLVLRPLTKEAQGRWECSASN------AVARVTTSTNVYV 503

  Fly   532 LMT---IVGGISVVAFLLVLTILVVVYIKCKKRTKLPPADVISEHQITKNGGVSCKLEPGDRTSN 593
            |.|   :|..:|||                    .||.             |.:...|||     
Mouse   504 LGTSPHVVTNVSVV--------------------PLPK-------------GANVSWEPG----- 530

  Fly   594 YSDLKVDISGGYVPYGDYSTHYSPPPQYLTTCSTKSNGSSTIMQNNHQNQLQLQQQQQQSHHQHH 658
                   ..|||:.  .:|..|:|                            |.::..::||...
Mouse   531 -------FDGGYLQ--RFSVWYTP----------------------------LAKRPDRAHHDWV 558

  Fly   659 TQTTTLPMTFLTNSSGGSLTGSIIGSREIRQDNGLPSLQSTT-----------------ASVVSS 706
            :....:..|.|.                      :|.||:..                 :.:|.|
Mouse   559 SLAVPIGATHLL----------------------VPGLQAHAQYQFSVLAQNKLGSGPFSEIVLS 601

  Fly   707 SPNGSCSNQSTTAATTTTTHVVVPSSMALSVDPRYSAIYGNPYLRSSNSSLL--PPPTAV 764
            .|.|    ..||.|        .|......:.|..|...|...:|:....||  .||..:
Mouse   602 IPEG----LPTTPA--------APGLPPTEIPPPLSPPRGLVAVRTPRGVLLHWDPPELI 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 25/116 (22%)
Ig 42..114 CDD:299845 17/90 (19%)
C2-set_2 135..225 CDD:285423 20/96 (21%)
Ig_3 265..329 CDD:290638 14/72 (19%)
I-set 346..420 CDD:254352 21/84 (25%)
Ig 360..425 CDD:299845 21/75 (28%)
Ig5_KIRREL3-like 428..524 CDD:143235 20/97 (21%)
IG_like 435..524 CDD:214653 18/90 (20%)
Igsf9NP_001139272.1 IG_like 28..110 CDD:214653 17/87 (20%)
Ig 136..223 CDD:386229 22/108 (20%)
Ig_3 227..305 CDD:372822 17/99 (17%)
Ig 341..404 CDD:386229 18/62 (29%)
Ig 436..500 CDD:319273 15/81 (19%)
FN3 508..599 CDD:238020 24/187 (13%)
FN3 625..715 CDD:238020 7/25 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 767..807
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 819..842
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 942..974
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1016..1079
PDZ-binding 1177..1179
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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