Sequence 1: | NP_001284835.1 | Gene: | rst / 31290 | FlyBaseID: | FBgn0003285 | Length: | 764 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009291422.1 | Gene: | ush2a / 568982 | ZFINID: | ZDB-GENE-060503-794 | Length: | 5243 | Species: | Danio rerio |
Alignment Length: | 969 | Identity: | 184/969 - (18%) |
---|---|---|---|
Similarity: | 293/969 - (30%) | Gaps: | 337/969 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 SPYTSYQNQRFAMEPQDQT--AVVGAR------------VTLPCRVINKQGTLQWTK-------- 62
Fly 63 DDFGLGTSRDLSGFERYAMVGSDEEGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTFAGLT 127
Fly 128 VLVPPE---APKITQGDVIYATEDRKVEIE-CVSVGGKPAAEITWIDGLGNVLTDNIEYTVIPLP 188
Fly 189 DQRRFTAKSVLRLTPKKEHHNTNFSCQAQNTA-------DRTYRSAKIRVEVKYAPKVKVNVMGS 246
Fly 247 LPGGAGGSVGGAGGGSVHMSTGSRI--VEHSQVRLECRADANPSDVR-----YRWFINDE----- 299
Fly 300 ---PII----------------GGQKTEMVIRNVTRKFHDAIVKCEVQNSVGKSEDS-ETLDIS- 343
Fly 344 ---YAPSFRQRPQSMEADVGSVVSLTCEVDSNPQPEIVWIQHPSDRVVGTSTNLTFSVSNETAGR 405
Fly 406 YYCKANVPGYAEISADAYVYLKGSPAI-GSQRTQYGL---VGDTARIECFASS----VPRAR-HV 461
Fly 462 SWTFNGQEISSESGHDYSILVDAVPGGVKS---TLIIRDSQAYHYGKYNCTVV-----NDYG--- 515
Fly 516 ND-----------------VAEIQLQAKKSVSLLMTIVG---GISVVAFLLVLTIL--------- 551
Fly 552 -----------VVVYIKCKKRTKLPPAD---VISEHQ----------ITKNGGV-----SCKLEP 587
Fly 588 GDRT-SNYSDLK-------------------------VDISGG----YVPYGDYSTHYSPPPQYL 622
Fly 623 TTCSTKSNGSSTIMQNNHQNQLQLQQQQQQSHHQHHTQTTTLPMTFLTNSSGGSLTGS---IIGS 684
Fly 685 -----------------------REIRQDNG-LPSLQSTTASVVSSSPNGSCSNQSTTAATTTTT 725
Fly 726 HVVV-----PSSMALSVDPRYSAIY-----------GNPYLRSSNSSLLP----PPTAV 764 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rst | NP_001284835.1 | IG_like | 34..130 | CDD:214653 | 24/117 (21%) |
Ig | 42..114 | CDD:299845 | 18/91 (20%) | ||
C2-set_2 | 135..225 | CDD:285423 | 20/97 (21%) | ||
Ig_3 | 265..329 | CDD:290638 | 15/94 (16%) | ||
I-set | 346..420 | CDD:254352 | 6/73 (8%) | ||
Ig | 360..425 | CDD:299845 | 3/64 (5%) | ||
Ig5_KIRREL3-like | 428..524 | CDD:143235 | 29/132 (22%) | ||
IG_like | 435..524 | CDD:214653 | 27/124 (22%) | ||
ush2a | XP_009291422.1 | Laminin_G_3 | 160..297 | CDD:290121 | |
Laminin_N | 307..528 | CDD:295486 | |||
EGF_Lam | 529..577 | CDD:238012 | |||
EGF_Lam | 586..638 | CDD:238012 | |||
Laminin_EGF | 653..703 | CDD:278482 | |||
Laminin_EGF | 706..756 | CDD:278482 | |||
EGF_Lam | 759..797 | CDD:214543 | |||
Laminin_EGF | 808..857 | CDD:278482 | |||
EGF_Lam | 859..912 | CDD:238012 | |||
EGF_Lam | 913..963 | CDD:238012 | |||
EGF_Lam | 965..1014 | CDD:238012 | |||
EGF_Lam | 1015..1064 | CDD:238012 | |||
FN3 | 1177..1253 | CDD:238020 | 16/81 (20%) | ||
FN3 | 1264..1375 | CDD:238020 | 30/130 (23%) | ||
FN3 | 1386..1469 | CDD:214495 | 15/90 (17%) | ||
LamG | 1537..1699 | CDD:238058 | 31/161 (19%) | ||
LamG | 1737..1890 | CDD:238058 | 24/170 (14%) | ||
FN3 | 1981..2071 | CDD:238020 | 3/5 (60%) | ||
FN3 | 2163..2253 | CDD:238020 | |||
FN3 | 2258..2341 | CDD:238020 | |||
FN3 | 2352..2443 | CDD:238020 | |||
FN3 | 2447..2544 | CDD:238020 | |||
FN3 | 2547..2633 | CDD:238020 | |||
FN3 | 2635..2733 | CDD:238020 | |||
FN3 | 2743..2807 | CDD:238020 | |||
FN3 | 2830..2932 | CDD:238020 | |||
fn3 | 2939..3014 | CDD:278470 | |||
FN3 | 3032..>3099 | CDD:238020 | |||
FN3 | 3542..3611 | CDD:238020 | |||
FN3 | 3615..3701 | CDD:238020 | |||
fn3 | 3718..3784 | CDD:278470 | |||
FN3 | 3801..3887 | CDD:238020 | |||
FN3 | 3908..3971 | CDD:238020 | |||
FN3 | 3996..4086 | CDD:238020 | |||
FN3 | 4186..4284 | CDD:238020 | |||
fn3 | 4288..4366 | CDD:278470 | |||
FN3 | 4382..4465 | CDD:238020 | |||
FN3 | 4470..4553 | CDD:238020 | |||
FN3 | 4555..4653 | CDD:238020 | |||
FN3 | 4679..4753 | CDD:238020 | |||
fn3 | 4760..4830 | CDD:278470 | |||
FN3 | 4864..4955 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |