DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rst and SDK2

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001138424.1 Gene:SDK2 / 54549 HGNCID:19308 Length:2172 Species:Homo sapiens


Alignment Length:696 Identity:142/696 - (20%)
Similarity:230/696 - (33%) Gaps:264/696 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLATIVGM--VRS-------SPYTSYQNQRFAMEP-QDQTAVVGARVTLPCRVINKQGTLQWTK 62
            ||:.|::.:  :|:       |||       |..|| :.|..:.|.|:.|.|..   :|:  |..
Human     4 LLIWTLLALHQIRAARAQDDVSPY-------FKTEPVRTQVHLEGNRLVLTCMA---EGS--WPL 56

  Fly    63 DDFGLGTSRDLSGFE---RY---------------------------------AMVGSDEEG--- 88
            :...|..:|:|:.|.   ||                                 |.:||.|||   
Human    57 EFKWLHNNRELTKFSLEYRYMITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKH 121

  Fly    89 -------------------------------------------DYSLDIYPVMLDDDARYQCQVS 110
                                                       :.:|.|...:..|..||..|..
Human   122 QSVSHGEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 186

  Fly   111 PGPEG-----QPAIRSTFAGL---------TVLVPPEAPKITQGDVIYATEDRKVEIECVSVGGK 161
            ....|     || |..|...:         |:::||:...:..|       ..:|.:|||: ..:
Human   187 NDKNGDNKTSQP-ITLTVENVGGPADPIAPTIIIPPKNTSVVAG-------TSEVTLECVA-NAR 242

  Fly   162 PAAE--ITW-IDG--LGNVLTDNIEYTVIPLP---DQRRFTAKSVLR---------------LTP 203
            |..:  |.| .||  |...::|:.....||.|   |...:..::|||               |.|
Human   243 PLIKLHIIWKKDGVLLSGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEP 307

  Fly   204 -----KKEHHNT-------NFSCQAQNTADRT---YRSAKIRVEVKYAPKVKVNVMGSLPGGAGG 253
                 :.|.|.|       :..|||:.....:   |:.|.: |||:...:.:..           
Human   308 PQFVKEPERHITAEMEKVVDIPCQAKGVPPPSITWYKDAAV-VEVEKLTRFRQR----------- 360

  Fly   254 SVGGAGGGSVHMSTGSRIVEHSQVRLECRADANPSDVRYRWFINDEPIIGGQKTEMVIRNVTRKF 318
                                                       ||    ||.:...::.:.|..|
Human   361 -------------------------------------------ND----GGLQISGLVPDDTGMF 378

  Fly   319 HDAIVKCEVQNSVGKSEDSETLDI-SYAPSFRQRPQSMEADVGSVVSLTCEVDSNPQPEIVWIQH 382
                 :|..:|:.|:.:.|..|.: |.||:..:.|.......|..|.|.||....|:|.|.|  .
Human   379 -----QCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITW--Q 436

  Fly   383 PSDRVVGT------------STNLTFSVSN-ETAGRYYCKA-NVPGYAEISADAYVYLKGSPAIG 433
            ..:|::.:            |.:|..|.:: ..||.|.|.| |..|..|.|||..|:.: :....
Human   437 KGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWAR-TRITK 500

  Fly   434 SQRTQYGLVGDTARIECFASSVPRA--RHVSWTFNGQEISSESGHDYSILVDAVPGGVKSTLIIR 496
            ..:.|..:.|..|.:.|..:..||.  |:: |..:|..:.:|| |. .|.:|.     ..:|.|.
Human   501 PPQDQSVIKGTQASMVCGVTHDPRVTIRYI-WEKDGATLGTES-HP-RIRLDR-----NGSLHIS 557

  Fly   497 DSQAYHYGKYNCTVVNDYGNDVAEIQLQAKK-------SVSLLMTI 535
            .:.:...|.|.|.|::..|||.....|:.::       .|:.|.|:
Human   558 QTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTV 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 32/192 (17%)
Ig 42..114 CDD:299845 24/153 (16%)
C2-set_2 135..225 CDD:285423 27/127 (21%)
Ig_3 265..329 CDD:290638 7/63 (11%)
I-set 346..420 CDD:254352 23/87 (26%)
Ig 360..425 CDD:299845 24/78 (31%)
Ig5_KIRREL3-like 428..524 CDD:143235 23/97 (24%)
IG_like 435..524 CDD:214653 23/90 (26%)
SDK2NP_001138424.1 Ig 27..109 CDD:299845 17/93 (18%)
IG_like 40..109 CDD:214653 12/73 (16%)
I-set 120..203 CDD:254352 10/83 (12%)
Ig 132..210 CDD:299845 11/78 (14%)
IG_like 222..304 CDD:214653 19/89 (21%)
IGc2 233..286 CDD:197706 15/53 (28%)
I-set 308..397 CDD:254352 22/152 (14%)
Ig 326..394 CDD:143165 18/131 (14%)
I-set 402..492 CDD:254352 26/91 (29%)
Ig 416..492 CDD:299845 24/77 (31%)
Ig 502..586 CDD:299845 24/91 (26%)
IG_like 502..586 CDD:214653 24/91 (26%)
FN3 590..681 CDD:238020 3/14 (21%)
FN3 693..786 CDD:238020
FN3 794..890 CDD:238020
FN3 895..983 CDD:238020
FN3 993..1087 CDD:238020
FN3 1099..1194 CDD:238020
FN3 1201..1290 CDD:238020
FN3 1301..1394 CDD:238020
FN3 1400..1484 CDD:238020
FN3 1503..1616 CDD:238020
FN3 1626..1719 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1707..1729
FN3 1724..1805 CDD:238020
FN3 1837..1916 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2039..2067
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2098..2172
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q6V4S5 2166..2172
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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