DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rst and klg

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster


Alignment Length:499 Identity:107/499 - (21%)
Similarity:166/499 - (33%) Gaps:153/499 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RFAMEPQDQTAVVGARVTLPCRVIN--------KQGTLQWTKDDFGLGTSRDLSGFERYAMVGSD 85
            ||........||||..:.|||:|.|        ::||...|..:  :..:||    ||..::.. 
  Fly   102 RFLSRGHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNVLTASN--IMVTRD----ERVRLIDG- 159

  Fly    86 EEGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTFAGLTVLVPPEAPKITQGDVIYATEDRK 150
                |:|:|..:...|...|.||:|     ....|.....:.:||||....|.....:.|.:...
  Fly   160 ----YNLEISDLEPQDAGDYVCQIS-----DKINRDQVHTVEILVPPSVRAIPTSGQLQARKGGP 215

  Fly   151 VEIECVSVGGKPAAEITWIDGLGNVLTDNIEYTVIPLPDQRRFTAK----SVLRLTPKKEHHNTN 211
            :.:||.. .|.|...|.|....|                ..:.||:    .:|.|...:......
  Fly   216 ITLECKG-SGNPVPSIYWTKKSG----------------ANKSTARIGDGPILTLEKLERQQAGV 263

  Fly   212 FSCQAQN------TADRTYRSAKIRVEVKYAPKVKVNVMGSLPGGAGGSVGGAGGGSVHMSTGSR 270
            :.|.|.|      |.|       :|::|.|.|.::|.                 ...:|...|  
  Fly   264 YQCTADNGVGDPVTVD-------MRLDVLYPPDIQVE-----------------KSWIHSGEG-- 302

  Fly   271 IVEHSQVRLECRADANPSDVRYRWFINDEPIIGGQKTEMVIRNVTRKFHDAIVK----------- 324
                .:.:|.|...|:|. ....|:.|..||   |.|:..|.......|...::           
  Fly   303 ----FEAKLVCIVFADPV-ATVSWYQNSFPI---QSTDRRIMATRANRHMLTIRHIQQEDFGNYS 359

  Fly   325 CEVQNSVGKSEDSETLDIS--------YAPSFRQRPQSMEADVGSVVSLTCEVDSNPQPEIV--- 378
            |...||:|:|.  :.:::|        |:|.:.:.|.|        .:||.::||.|..|.|   
  Fly   360 CVADNSLGRSR--KYMELSGRPGAAEFYSPKWGRSPDS--------YNLTWKIDSYPPLEEVRLL 414

  Fly   379 ---------------W---IQHPSDRVVGTSTN--LTFSVSNETAGRYY----CKANVPGYAEIS 419
                           |   |..|..|.......  :::::.|...|.||    ...|..|:.|:|
  Fly   415 YRRVQMNETYQQPGRWHDFILTPEHRPASEPLTHIMSYTIKNLHPGGYYEAIVQAKNRYGWNEVS 479

  Fly   420 -ADAYVYLKGSPAIGSQRTQYGLVGDTARIECFASSVPRARHVS 462
             ...:|....|..||.:..           |..|||..|:...|
  Fly   480 DIFQFVVATNSQDIGPEDA-----------EVVASSKSRSNSAS 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 25/103 (24%)
Ig 42..114 CDD:299845 21/79 (27%)
C2-set_2 135..225 CDD:285423 18/99 (18%)
Ig_3 265..329 CDD:290638 14/74 (19%)
I-set 346..420 CDD:254352 22/101 (22%)
Ig 360..425 CDD:299845 19/92 (21%)
Ig5_KIRREL3-like 428..524 CDD:143235 9/35 (26%)
IG_like 435..524 CDD:214653 6/28 (21%)
klgNP_524454.2 DUF1370 63..>124 CDD:284518 9/21 (43%)
IG_like 109..195 CDD:214653 25/101 (25%)
Ig 118..191 CDD:143165 21/88 (24%)
IG_like 205..274 CDD:214653 15/85 (18%)
IGc2 213..273 CDD:197706 14/76 (18%)
IGc2 301..367 CDD:197706 16/75 (21%)
FN3 392..486 CDD:238020 21/101 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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