DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rst and side-VII

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001262432.1 Gene:side-VII / 41184 FlyBaseID:FBgn0037736 Length:939 Species:Drosophila melanogaster


Alignment Length:969 Identity:200/969 - (20%)
Similarity:337/969 - (34%) Gaps:297/969 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MQLLLLATIVGMVRSSPYTSYQNQRFAMEPQDQTAVVGARVTLPCRVINKQG----TLQWTKDDF 65
            |:||||..:...:..|...|.......:|     ::||..:.|||.|....|    .:.|.:||.
  Fly     1 MELLLLFMLALQLIESSIGSKDVPIHQIE-----SIVGENIYLPCNVTTYDGDEPVLVLWYRDDK 60

  Fly    66 G---------LGTSR------DLSGF-ERYAMVGSDEEGDYSLDIYPVMLDDDARYQCQVS---- 110
            |         .|.|:      |.|.| :|...:...|.|  .|.|......|...|:|:|.    
  Fly    61 GTPIYSIDIRAGVSKAPKRWSDDSVFGDRAYFIFDKEPG--KLSIQNTQASDSGTYRCRVDFLKA 123

  Fly   111 -----------PGPEGQPAIR--STFAGLTVLVPPEAPKITQGDVIYATEDRKVEIECVSVGGKP 162
                       ..|..|..||  |.....||:.|     .::||:        |.::|..:||.|
  Fly   124 QTINSRIRLNVISPPKQVIIRDSSNVERSTVVGP-----YSEGDI--------VSLKCQVIGGYP 175

  Fly   163 AAEITWI-DG------LGNVLTDNIEYTVIPLPDQRRFTAKSVLRLTPKKEHHNTNFSCQAQNTA 220
            ...|:|. ||      |.::....|....|.||...|             |..|:..:|:|.:..
  Fly   176 TPTISWYRDGIEIPCELSHLAGGKIIECEITLPSLGR-------------EDLNSRLTCRALSHP 227

  Fly   221 DRTYRSAKIRVEVKYAPKVKVNVMGS-LPGGAGGSVGGAGGGSVHMSTGSR---IVEHSQ--VRL 279
            ......|.:::::.:|| :.:.::|: .|..||...     ..:..|.|||   ::...|  :||
  Fly   228 RAPIVEAVVQIDMNFAP-LNIRLLGAHQPLSAGRRY-----DLLCQSAGSRPPAVITWWQNGIRL 286

  Fly   280 ECRADANPSDVRYRWFINDEPIIGGQKTEMVIRNVTRKFHDAIVKCEVQNSVGKS---EDSETLD 341
            |...:...||             |.|.|..:..::::......:.|:..|....|   ||...||
  Fly   287 EKTTETTSSD-------------GNQTTSTLSISLSKSDAGKYLSCKAYNHAVPSEPLEDGWKLD 338

  Fly   342 ISYAPSFRQR------PQSMEADVGSVVSLTCEVDSNPQP-EIVWIQHPSDRVVGTSTNLTFSVS 399
            |.|.|....|      |.::..  |:.|...|.|.::|.. .|.| :| :::.:..:.:|...:|
  Fly   339 IQYVPEAYVRLGTSLDPSTLRE--GTDVYFDCLVMAHPNVFRIEW-RH-NEQPLSHNISLGVIIS 399

  Fly   400 NE----------TAGRYYCKA-NVPGYAEISADAYVYLKGSPAIG-SQRTQYGLV-GDTARIECF 451
            |.          |||.|.|.. |..|.. |||...:.:..:|... :|:..||:. .:.|::.|.
  Fly   400 NHSLVLQGVTRATAGNYSCVGFNAEGEG-ISAPFALNILYAPTCAQNQKKVYGIAKQEDAKVMCT 463

  Fly   452 ASSVPRARHVSWTFN--GQEISSESGH------------------DYSILV---------DAVP- 486
            ..:.||....|||||  .:.|...:.|                  ||..|:         ..|| 
  Fly   464 VDANPREVEFSWTFNNSAESIDVATNHIIRSGTTSIVTYTPITELDYGTLLCLASNKIGKQRVPC 528

  Fly   487 ------------------GGVKST-LIIRDSQAYHYG---KYNCTVVNDYGNDV----------- 518
                              ..:..| |.:..|..::.|   .:|..:::.|..::           
  Fly   529 VFHIIAAGRPEKVHNCTVNNISMTSLTVTCSDGFNGGLPQSFNLELLDSYTQEIKANITSTIPKF 593

  Fly   519 ------------------------------------AEIQLQAKKSVSL--------LMTIVGGI 539
                                                .|.||.::::.:|        :|::..|:
  Fly   594 TVPGLSPGSIYRLNIYAFNTKGRSDPAIVNAAMLRMPEKQLTSEQTHNLRAELLFSPVMSLTIGL 658

  Fly   540 SVVAFLLVLTILVVVYIKC----KKRTKLPPADVISEHQITKNGGVSCKLEPGDRTSNYSDL--- 597
            ::...:.||.|::.:.|.|    ::|.|     .:|...|:::....    |.|::|...::   
  Fly   659 TLAVLVAVLAIILALRIPCTASSRRRQK-----ELSNENISRDESPG----PSDKSSGSKEVDDC 714

  Fly   598 ---KVDISGGYVPYG---DYSTHYSPPPQYLTTCSTKSNGSSTIMQNNHQNQLQLQQQQQQSHHQ 656
               ..|:    ||..   |.........|.::|..|..:.:..|..|..|:....:...:.||  
  Fly   715 DEKNPDV----VPESIEPDEQAESIRKRQQISTIDTNRSPNRGIFVNEQQHLTAAEISLRASH-- 773

  Fly   657 HHTQTTTLPMTFLTNSSG-GSLTGSIIGSREIRQDNGLPSLQSTTASVVSSSPNGSCSN------ 714
                    .:.:.|..|| .:...|.:|...|   |..|.:.|.:.| ..:.|..|..|      
  Fly   774 --------GIGYCTLRSGMHAQAQSSVGEISI---NVTPHVYSNSIS-QCTLPRQSSQNVWNNYN 826

  Fly   715 -QSTTAATTTTTHVVVPSSMALSVDPRYSA--IYG---NPYLRSSNSSL------LPPP 761
             ..|.|..|:|.|.:......::|.....|  ::|   :| .::||||:      ||.|
  Fly   827 CNITGARPTSTFHQLTFPQGRVNVGGHNPAQPLHGHAPSP-SQASNSSMASSTNTLPQP 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 32/132 (24%)
Ig 42..114 CDD:299845 24/106 (23%)
C2-set_2 135..225 CDD:285423 21/96 (22%)
Ig_3 265..329 CDD:290638 14/68 (21%)
I-set 346..420 CDD:254352 22/91 (24%)
Ig 360..425 CDD:299845 21/76 (28%)
Ig5_KIRREL3-like 428..524 CDD:143235 28/196 (14%)
IG_like 435..524 CDD:214653 27/188 (14%)
side-VIINP_001262432.1 IG_like 32..134 CDD:214653 25/103 (24%)
V-set 32..134 CDD:284989 25/103 (24%)
IGc2 160..>214 CDD:197706 17/74 (23%)
Ig 262..328 CDD:299845 15/83 (18%)
IG_like 264..323 CDD:214653 14/71 (20%)
IGc2 360..425 CDD:197706 17/68 (25%)
Ig_3 456..519 CDD:290638 14/62 (23%)
FN3 538..620 CDD:238020 6/81 (7%)
FAM176 643..741 CDD:291517 19/110 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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