DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rst and kirrel1a

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001349348.1 Gene:kirrel1a / 405804 ZFINID:ZDB-GENE-040426-2126 Length:819 Species:Danio rerio


Alignment Length:805 Identity:216/805 - (26%)
Similarity:332/805 - (41%) Gaps:146/805 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLLATIVGMVRSSPYTSYQNQRFAMEPQDQTAVVGARVTLPCRVINKQGTLQWTKDDFGLGTSR 71
            ||||:..:...|      .:..||:.||.||:.|:|.||.|.|.|.|..|.:|||||...||...
Zfish     5 LLLLSLALSFHR------VRTARFSQEPADQSVVLGQRVVLSCVVFNYSGIVQWTKDGLALGIGE 63

  Fly    72 DLSGFERYAMVGSDEEGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTFAGLTVLVPPEAPK 136
            ||..:.||.::...:.|.|:|:|....|.||:.|:||.:     :.|:||..|.||||:||:.|.
Zfish    64 DLRAWPRYRVLRLVDVGQYNLEISAAELSDDSLYECQAT-----EAALRSRRAKLTVLIPPDEPV 123

  Fly   137 ITQGDVIYATEDRKVEIECVSVGGKPAAEITW-IDGL---GNVLTDNIEYTVIPLPDQRRFTAKS 197
            |.....|..|......:.|||.|.|||:.|.| .|||   |.|.|..:      |||::|.|.:|
Zfish   124 IEGSPEILLTAGVPYNMSCVSRGAKPASVIEWQKDGLPIEGAVSTTEV------LPDRKRVTTRS 182

  Fly   198 VLRLTPKKEHHNTNFSCQAQNTADRTYRSAKIRVEVKYAPKVKVNVMGSLPGGAGGSVGGAGGGS 262
            .|.:.|.......||:|.|.|.|....:.|.|.:.|.:.|.|.:::                   
Zfish   183 YLPIQPLDTDTGKNFTCVATNLAVPMGKRATITLNVHHPPVVTLSI------------------- 228

  Fly   263 VHMSTGSRIVEHSQVRLECRADANPSDVRYRWFINDEPIIGGQKTEMVIRNVTRKFHDAIVKCEV 327
                ....::|..:|...|:|.|||..:.|:| .....:|.|.:..:.:......|....|.|:|
Zfish   229 ----EPRSVLEGERVTFTCQATANPPIMGYKW-AKGGVVIQGARESVFVTKADHSFFTEPVSCQV 288

  Fly   328 QNSVGKSEDSETLDISYAPSFRQRPQSMEADVGSVVSLTCEVDSNPQPEIVWIQHPSDRVVGTST 392
            .|:||.:..|..:|:.:.|.....|:.:..||.|.|:|.|:...||...:.|.:..|..|:..:.
Zfish   289 FNAVGSTNVSILVDVHFGPILVVEPKPVTVDVDSDVTLNCKWAGNPPLTLTWTKKGSSMVLSNNN 353

  Fly   393 NLTF-SVSNETAGRYYCKANVPGYAEISADAYVYLKGSPAIGSQRTQYGLVGDTARIECFASSVP 456
            .|.. |||...||:|.|||.||.......:..:.:.|.|.|.|:..||.:.|:...::|:.:|.|
Zfish   354 QLYLKSVSQADAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSEPFQYAVRGERGEVKCYIASTP 418

  Fly   457 RARHVSWTFNGQEISSESG---HDYSI---LVDAVPGGVKSTLIIRD-SQAYHYGKYNCTVVNDY 514
            ....:.|.:.......|.|   ..|::   ...|..|.|.|||.|.: .::.....||||..|.:
Zfish   419 PPDKIVWAWKENVWEKEKGTLSERYTVEQSKPSAQGGAVLSTLTINNIMESDFQSTYNCTAWNSF 483

  Fly   515 GNDVAEIQLQAKKSVSLLMTIVGGISVVAFLLVLTILVVVYIKCKKR------TKLPPADVISE- 572
            |:....|.|:..:.|.:.: |.||....:.||:|.:|.:|....::|      ..|...|:..| 
Zfish   484 GSGTMIISLEEMEIVPVGI-IAGGTVGCSILLLLCLLALVLFLYRQRKGSRRGVTLGKPDIKVET 547

  Fly   573 -----HQITKNGG----------------VSCKLEPGDRT-SNYSDLKVDISGGYVPYGDYSTHY 615
                 |.:.::.|                .|..|.|..:. .:..|||.::....:   |....|
Zfish   548 INKESHSLEEDSGSVSTATRMVKAMYSFLPSVTLSPSSQPFKDDIDLKQELRSDTL---DTRQDY 609

  Fly   616 SPPPQYLTTCSTKSNGSSTIMQNNHQNQLQLQQQQQQSHHQHHTQTTTLPMTFLTNSSGGSLTGS 680
            .        ....:||...:..:.|      .:.:..|...|::...|      ::..||:    
Zfish   610 E--------LKDPTNGYYNVRASTH------DEGRPASRSMHYSDYRT------SSQPGGA---- 650

  Fly   681 IIGSREIRQDNGLPSLQSTTASVVSSS---PNGSCSNQSTTAATTTTTHVVVPSSMALSVDPR-Y 741
                                |:|||||   |.|:.:...|.::       :.|.|.|...||| .
Zfish   651 --------------------AAVVSSSSGPPPGATAGPGTPSS-------LAPGSRAGCYDPRPP 688

  Fly   742 SAIYGNPYLR-----SSNSSLLPPP 761
            |.:..|.|.:     .:..|..|||
Zfish   689 SRLSHNSYAQFNTFTRAGQSQQPPP 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 40/95 (42%)
Ig 42..114 CDD:299845 29/71 (41%)
C2-set_2 135..225 CDD:285423 33/93 (35%)
Ig_3 265..329 CDD:290638 15/63 (24%)
I-set 346..420 CDD:254352 25/74 (34%)
Ig 360..425 CDD:299845 21/65 (32%)
Ig5_KIRREL3-like 428..524 CDD:143235 28/102 (27%)
IG_like 435..524 CDD:214653 24/95 (25%)
kirrel1aNP_001349348.1 I-set 21..115 CDD:333254 41/98 (42%)
Ig2_KIRREL3-like 137..218 CDD:143236 31/86 (36%)
I-set 222..303 CDD:333254 21/104 (20%)
Ig_3 307..372 CDD:316449 21/64 (33%)
Ig5_KIRREL3 390..493 CDD:143306 28/102 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582420
Domainoid 1 1.000 84 1.000 Domainoid score I8167
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10089
Inparanoid 1 1.050 273 1.000 Inparanoid score I2950
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141865at33208
OrthoFinder 1 1.000 - - FOG0001084
OrthoInspector 1 1.000 - - mtm6357
orthoMCL 1 0.900 - - OOG6_103358
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1593
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.760

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