DRSC/TRiP Functional Genomics Resources

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Protein Alignment rst and dpr20

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_612066.1 Gene:dpr20 / 38101 FlyBaseID:FBgn0035170 Length:525 Species:Drosophila melanogaster


Alignment Length:605 Identity:108/605 - (17%)
Similarity:183/605 - (30%) Gaps:231/605 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLLATIVGMVRSSPYTSY------QNQRFAMEPQDQTAV-----VGARVTLPCRVINKQGTLQW 60
            |||:|||:|.......|.|      |:....:||::.|.|     .....|....:.|:..||:.
  Fly    43 LLLIATIMGSGLVQAKTIYDSVNMIQSLDALVEPRETTKVPLQTTPATPPTAHAHIHNQVSTLRS 107

  Fly    61 TKDDFGLGTSRDLSGFERYAMVGSDE--EGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTF 123
            :.:|                   ||:  :|||.:                    ||.|   .||.
  Fly   108 SYED-------------------SDDGVDGDYVI--------------------PESQ---TSTV 130

  Fly   124 AGLTVLVPPEAPKITQGDVIYATEDRKVEIECVSVGGKPAAEITWIDGLGNVLTDNIEYTVIPLP 188
            |.|                   .:|.       |:.|:....::...|.|         ||.|  
  Fly   131 AIL-------------------DQDS-------SMKGQDMESLSLQAGSG---------TVSP-- 158

  Fly   189 DQRRFTAKSVLRLTPKKEHHNTNFSCQ---AQNTADRTYRSAKIRVEVKYAPKVKVNVMGSLPGG 250
                       :.:|....|..|.|.|   :||.      :|.:       |.........||..
  Fly   159 -----------KSSPDSSGHKKNASFQQIGSQNV------NALV-------PATVATTSSGLPSS 199

  Fly   251 AGGSVGGAGGGSVHMSTGSRIVEHSQVRLECRADANPSDVRYRWFINDEPIIGGQKTEMVIRNVT 315
            :..|:......:.:.|||  :|.:|.|:::.:                .|:..||||:..:.|. 
  Fly   200 SNASLATPTEPARNRSTG--LVRNSAVKVDSK----------------HPLSKGQKTDAPMLNY- 245

  Fly   316 RKFHDAIVKCEVQNSVGKSEDSETLDISYAPSFRQ-----RPQSMEADVGSVVSLTCEVDSNPQP 375
                       :.::...:......|..|.|.|..     :..::....||.:.|.|.:......
  Fly   246 -----------IFDTFSSANKHHHHDQRYGPHFEDVQRIGQATNLTVQAGSSIHLNCRISLLQDK 299

  Fly   376 EIVWIQHPSD------------RVVGTST---------------NLTFSVSN---ETAGRYYCKA 410
            .:.|::|.:.            ..||..|               |....::|   :....|.|:.
  Fly   300 TVSWVRHNTQDEGKDNGNALDLLTVGMHTYTGDKRYKMEFQYPNNWRLKITNVKKDDEAIYECQI 364

  Fly   411 NVPGYAEISADAYVYLK--------GSPAIGSQRTQYGLVGDTARIEC------FASSVPRARHV 461
            :......|..:.:|...        |.|.    :.:|..:..|.::.|      ..|||...:|:
  Fly   365 STHPPRVIQINLHVNAPKVMIVDEVGDPL----QEKYYEIDSTLQLSCVVRNVAMTSSVVFWKHM 425

  Fly   462 SWTFN------GQEISSESGHDYSILVDAVPGGVKSTLIIRDSQAYHYGKYNCTVVNDYGNDVAE 520
            ....|      |..:.:|...|          |..|||.|........|.|.|:        ::|
  Fly   426 DNILNYDVTRGGVSVKTELMED----------GANSTLSIAKISKTDSGNYTCS--------ISE 472

  Fly   521 IQLQAKKSVSLLMTIVGGIS 540
            .|     :.::::.|:.|.|
  Fly   473 FQ-----NFTIVVHILNGES 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 20/102 (20%)
Ig 42..114 CDD:299845 10/73 (14%)
C2-set_2 135..225 CDD:285423 15/92 (16%)
Ig_3 265..329 CDD:290638 12/63 (19%)
I-set 346..420 CDD:254352 16/108 (15%)
Ig 360..425 CDD:299845 14/94 (15%)
Ig5_KIRREL3-like 428..524 CDD:143235 23/107 (21%)
IG_like 435..524 CDD:214653 21/100 (21%)
dpr20NP_612066.1 IG_like 278..365 CDD:214653 13/86 (15%)
Ig 279..378 CDD:299845 14/98 (14%)
Ig 400..471 CDD:299845 18/88 (20%)
IG_like 402..480 CDD:214653 20/100 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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