Sequence 1: | NP_001284835.1 | Gene: | rst / 31290 | FlyBaseID: | FBgn0003285 | Length: | 764 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
Alignment Length: | 910 | Identity: | 165/910 - (18%) |
---|---|---|---|
Similarity: | 288/910 - (31%) | Gaps: | 295/910 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 MEPQDQTAVVGARVTLPCRVI-NKQGTLQWTKDDFGLGTSRDLSGFERYAMVGSDEEGDYSLDIY 95
Fly 96 PVMLDDDARYQCQVSPGPEG--------------QPAIRSTFAGLTVLVPPEAPKITQGDVIYAT 146
Fly 147 EDRKVEIECVSVGGKPAAEITW-IDG----------LGNVLT---DNIEY--------------- 182
Fly 183 ----------------TVIPLPDQRRFTAKSVL-------------------------RLTP--- 203
Fly 204 ---------------KKEHHNTNFSCQAQNTADRTYRSAKIRVEVKYAPKVKVNVMGSLPGGAGG 253
Fly 254 SVGGAGGGSVHMSTGSRIVEHSQVRLECRADANPSDVRYRW----------FINDEPIIG----G 304
Fly 305 QKTEMVIRNVTRKFHDAIVKCEVQNSVGKSEDSETLDISYAPSFRQRPQSMEADVGSVVSLTCEV 369
Fly 370 DSNPQPEIVWIQHPSD-----RVVGTSTNL-----TFSVSN---ETAGRYYCKANVPGYAE-ISA 420
Fly 421 DAYVYLKGSPAIGSQ-RTQYGLVGDTARIECFASSVPRARHVSWTFNGQEISSESGHDYSILVDA 484
Fly 485 VPGGVKSTLIIRDSQAYHYGKYNCTVVNDYGNDVAEIQL----------------QAKKSVSL-- 531
Fly 532 LMTIVGGISVVAFLL-----------VLTILVVVYIKCKKRTKLPPADVISEHQITKNG-GVSCK 584
Fly 585 LE----------PGDRTSNYSDLKVDISGGYVPYGDYSTH--YSPPPQ----------YLTTCST 627
Fly 628 KSNGS------STIMQNNHQNQLQLQQQQQQSHHQHHTQTTTLPMTFLTNSSGGSLTGSIIGSRE 686
Fly 687 IRQDNGLPSLQSTTASVVSSSPNGSCSNQSTTAATTTTTHVV------VPSSMALSVDPRYSAIY 745
Fly 746 745 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rst | NP_001284835.1 | IG_like | 34..130 | CDD:214653 | 26/110 (24%) |
Ig | 42..114 | CDD:299845 | 17/72 (24%) | ||
C2-set_2 | 135..225 | CDD:285423 | 25/177 (14%) | ||
Ig_3 | 265..329 | CDD:290638 | 11/77 (14%) | ||
I-set | 346..420 | CDD:254352 | 20/87 (23%) | ||
Ig | 360..425 | CDD:299845 | 20/78 (26%) | ||
Ig5_KIRREL3-like | 428..524 | CDD:143235 | 22/112 (20%) | ||
IG_like | 435..524 | CDD:214653 | 21/105 (20%) | ||
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | |||
Ig | 269..340 | CDD:143165 | |||
IG_like | 353..425 | CDD:214653 | 21/89 (24%) | ||
IGc2 | 361..413 | CDD:197706 | 17/69 (25%) | ||
I-set | 433..527 | CDD:254352 | 21/111 (19%) | ||
IGc2 | 446..517 | CDD:197706 | 16/88 (18%) | ||
I-set | 533..618 | CDD:254352 | 9/85 (11%) | ||
IGc2 | 544..607 | CDD:197706 | 5/62 (8%) | ||
Ig | 641..714 | CDD:143165 | 12/72 (17%) | ||
IGc2 | 735..804 | CDD:197706 | 18/69 (26%) | ||
I-set | 819..914 | CDD:254352 | 22/95 (23%) | ||
Ig | 833..921 | CDD:299845 | 19/88 (22%) | ||
FN3 | 918..1011 | CDD:238020 | 13/92 (14%) | ||
FN3 | 1018..1116 | CDD:238020 | 19/128 (15%) | ||
FN3 | 1124..1217 | CDD:238020 | 12/44 (27%) | ||
FN3 | 1222..1312 | CDD:238020 | |||
Ig | 1339..1406 | CDD:299845 | |||
FN3 | 1409..1499 | CDD:238020 | |||
FN3 | 1504..1584 | CDD:238020 | |||
Dscam_C | 1890..2008 | CDD:289151 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |