DRSC/TRiP Functional Genomics Resources

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Protein Alignment rst and dpr19

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001260336.1 Gene:dpr19 / 34408 FlyBaseID:FBgn0032233 Length:385 Species:Drosophila melanogaster


Alignment Length:423 Identity:89/423 - (21%)
Similarity:141/423 - (33%) Gaps:120/423 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLLATI---VGMVRSSPYTSYQNQRFAMEPQDQTAVV---GARVTLPCRV-INKQGTLQW-TKD 63
            ||||::.   ||.:.||........:.....::.|.|:   |....|||.| :|...|:.| .:.
  Fly    14 LLLLSSTFSDVGKITSSQNHFGNTLQSQFNTKNNTRVIAQKGGLAILPCVVKVNSPATVSWIRRK 78

  Fly    64 DF-----GLGTSRDLSGFERYAMVGSDEEGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTF 123
            ||     ||.|.   |..:|:.:..:...|.:||.|..|..:|...|:||:|..|.....|.   
  Fly    79 DFQLLTVGLSTH---SSDKRFLVEHTRHMGHWSLRIKAVREEDRGFYECQLSIYPTQSIVIE--- 137

  Fly   124 AGLTVLVPPEAPKITQGDVIYATEDRKVEIECVSVGGKPAAE----ITWIDGLGNVLTDNIEYTV 184
                :.:.....:|:....::..|...:.:||..   |.|.|    :.|..          :..:
  Fly   138 ----LKIVEAVAEISSAPELHIDETSTLRLECKL---KRATENPAFVFWYH----------DSKM 185

  Fly   185 IPLPDQRRFTAKSVLRLTPKKEHHNTNFSCQAQNTADRTYRSAKIRVEVKYAPKVKVN-VMGSLP 248
            |....|..|...|:.:..|:               :.:.|||:.........|....| |:.||.
  Fly   186 INYDSQGGFVVTSIGQSNPQ---------------SGQFYRSSPANKSRATMPMESSNGVLNSLL 235

  Fly   249 GGAGGSVGGAGGGSVHMSTGSRIVEHSQVRLECRADANPSDVRYRWFINDEPIIGGQKTEMVIRN 313
            |.:...  .|...:|..||.....:|....|     .|||                 .:.:.::.
  Fly   236 GSSDAI--KAPAANVPSSTPYMTQQHQSAYL-----LNPS-----------------VSVLTVKQ 276

  Fly   314 VTRKFHDAIVKCEVQNSVGKSEDSETLDISYAPSFRQRPQSMEADVGSVVSLTCEVDSNPQPEIV 378
            |..: |.....|                   ||| ..||.|:...|     |..|       :..
  Fly   277 VNFR-HAGNYTC-------------------APS-NARPASITVHV-----LRGE-------KTA 308

  Fly   379 WIQHPSDRVVGTSTN-------LTFSVSNETAG 404
            .:||.:..::.|.||       :|....|.|:|
  Fly   309 AMQHANRSILDTETNGNGTFGLITLGGLNGTSG 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 29/105 (28%)
Ig 42..114 CDD:299845 25/78 (32%)
C2-set_2 135..225 CDD:285423 13/93 (14%)
Ig_3 265..329 CDD:290638 10/63 (16%)
I-set 346..420 CDD:254352 17/66 (26%)
Ig 360..425 CDD:299845 11/52 (21%)
Ig5_KIRREL3-like 428..524 CDD:143235
IG_like 435..524 CDD:214653
dpr19NP_001260336.1 IG_like 50..127 CDD:214653 25/79 (32%)
IGc2 55..125 CDD:197706 22/72 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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