DRSC/TRiP Functional Genomics Resources

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Protein Alignment rst and DIP-theta

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster


Alignment Length:638 Identity:131/638 - (20%)
Similarity:222/638 - (34%) Gaps:175/638 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 EAPKITQGDVIYATEDRKVEIECVSVG--------GKPAAEITWIDGLGN-----VLTDNIEYTV 184
            |.|:|:...::.......|.|.|:|:.        .....|:..:|.:.:     ::.::.|:..
  Fly    33 EMPEISSRLIVATATAAVVSIICLSLALPGCAAQESDDEGELHHLDQMHHQHQDFIIGESEEHDH 97

  Fly   185 IP------------LPDQRRFTAKSVLRLTPKKE---------------HHNTNFSCQAQNTADR 222
            |.            |.|.|..|   |:...|:|:               .......|...|.  :
  Fly    98 IAHHLAEMQNKDELLEDIREDT---VVNAIPEKDLPKFGELLQNVTVPVSREAVLQCVVDNL--Q 157

  Fly   223 TYRSAKIRVEVKYAPKVKVNVMGSLPGGAGGSVGGAGGGSVHMSTGSRIVEHSQVR---LECRAD 284
            ||:.|.:||:.:....::.:|:..               :..||     :.|::.|   |..| |
  Fly   158 TYKIAWLRVDTQTILTIQNHVITK---------------NHRMS-----ITHAEKRAWILRIR-D 201

  Fly   285 ANPSDVRYRWF---INDEPIIGGQKTEMVIRNVTRKFHDAIVKCEVQNSVGKSEDSETLDISYAP 346
            ...||  ..|:   ||.:|                          :::.||      .||:...|
  Fly   202 VKESD--KGWYMCQINTDP--------------------------MKSQVG------YLDVVVPP 232

  Fly   347 SFRQRPQSMEADV--GSVVSLTCEVDSNPQPEIVW---------IQHPSDRVVGTSTNLTFS-VS 399
            .....|.|.:..:  ||.|:|.|....:|.|.|.|         :.:.::.|....:.||.: |:
  Fly   233 DILDYPTSTDMVIREGSNVTLKCAATGSPTPTITWRREGGELIPLPNGAEAVAYNGSFLTIAKVN 297

  Fly   400 NETAGRYYCKAN--VPGYAEISADAYVYLKGSPAIGSQRTQYGLVG----DTARIECFASSVPRA 458
            ....|.|.|.|:  :|  ..:|....:.:...|.|..|..   |||    ....:||.:.:.|::
  Fly   298 RLNMGAYLCIASNGIP--PTVSKRVMLIVHFPPMIWIQNQ---LVGAALTQNITLECQSEAYPKS 357

  Fly   459 RHVSWTFNGQEISSESGHDYSILVDAVPG----------GVKST--LIIRDSQAYHYGKYNCTVV 511
            .:. |..|...|              |||          |.|.|  |.|.:.....:|.|.|...
  Fly   358 INY-WMKNDTII--------------VPGERFVPETFESGYKITMRLTIYEVDIQDFGAYRCVAK 407

  Fly   512 NDYGNDVAEIQLQAKKSVSLLMTIVGGISVVAFLLVLTILVVVYIKCKKRTKLPPADVISEHQIT 576
            |..|:....|:|......:.:.|:...:|:       ..:.||.:|..|..:...:...:.:...
  Fly   408 NSLGDTDGAIKLYHIPQTTTMTTMAPTVSI-------NTVPVVLVKYNKEQRYGSSQNSNTNPYN 465

  Fly   577 KNGGVS---CKLEPGDRTSNYSDLKVDISG-GYVPYGDYSTHYSPPPQYLTTCSTKSNGSSTIMQ 637
            .|.|.|   .||:.|...|..||...  || ..|..|..|:.::....:    |:.|:.||...:
  Fly   466 FNPGNSQQNTKLQRGKSNSKGSDQSP--SGLNNVFVGATSSLWNSQDHH----SSSSSSSSASSR 524

  Fly   638 NNHQNQLQLQQQQQQSHHQHH--TQTTTLPMTFLTNSSGGSLTGSIIGSREIR 688
            ....:|.|..|||||:|...|  :..:......|||....|||..:...::::
  Fly   525 GRDHHQQQHHQQQQQNHGSDHGASYRSDGKSPHLTNHDAKSLTDDLDRMQDLK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653
Ig 42..114 CDD:299845
C2-set_2 135..225 CDD:285423 20/129 (16%)
Ig_3 265..329 CDD:290638 13/69 (19%)
I-set 346..420 CDD:254352 21/87 (24%)
Ig 360..425 CDD:299845 19/76 (25%)
Ig5_KIRREL3-like 428..524 CDD:143235 26/111 (23%)
IG_like 435..524 CDD:214653 24/104 (23%)
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 25/149 (17%)
IG_like 137..230 CDD:214653 25/149 (17%)
IG_like 240..324 CDD:214653 20/85 (24%)
IGc2 247..310 CDD:197706 17/62 (27%)
Ig 327..419 CDD:299845 26/109 (24%)
IG_like 343..420 CDD:214653 20/91 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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