Sequence 1: | NP_001284835.1 | Gene: | rst / 31290 | FlyBaseID: | FBgn0003285 | Length: | 764 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005166847.1 | Gene: | itgb4 / 335269 | ZFINID: | ZDB-GENE-030131-7209 | Length: | 1931 | Species: | Danio rerio |
Alignment Length: | 831 | Identity: | 159/831 - (19%) |
---|---|---|---|
Similarity: | 275/831 - (33%) | Gaps: | 279/831 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 QNQRF-AMEPQDQTAV-VGARVTLPCRVI-----NKQGTLQWTKDDFGLGTSRDLSGFE-RYAMV 82
Fly 83 GSDEEG--------------------DYSLDIYPVMLDDDARY----QCQV---SPGPEGQPA-- 118
Fly 119 -IRSTFAGLTVLVPPEAPKITQG-DVIY--ATEDRKVEIECVSVGGKPAAEITWIDGLGNVLTDN 179
Fly 180 IEYTVIPLPDQRRFTAKSVLRLTPKKEHHNTNFSCQAQNTADRT----YRSAKIRVE-------- 232
Fly 233 ---------------------VKYAPKVKVNVMGSL-----------------------PGGAGG 253
Fly 254 SVGGAGGGSVHMSTGSRIVEHSQVRLECRADANPS--------DVRYRWFINDEPIIGGQKTEMV 310
Fly 311 IRNVTRKFH--------DAIVKCEVQ----NSVGKSEDSETLDISYAPSFRQRPQSMEADVGSVV 363
Fly 364 SLTCEVDSNPQPEIVWIQHPSDRVVGTSTNLTFSVSNETAGRY-----YCKANVPGYAEISADAY 423
Fly 424 VYLKG---------SPAIGSQRTQYGLVGDTARIECFASSVPRARHVSWTFNGQE----ISSES- 474
Fly 475 -----------GHDYSILVDAVPGGVKSTLIIRDSQAYHYGKYNCTVVNDYGNDVAEIQLQAKKS 528
Fly 529 VSLLMTIVGGISVVAFLLVLTILVVVYIKCKKRTKLPPADVISEHQITKNGGVSCKLEPGDRTSN 593
Fly 594 YSDLKVDISGGYVPYGDYSTHYSPPPQYLTTCSTKSNGSSTIMQNNHQNQLQLQQQQQQSHHQHH 658
Fly 659 TQTTTLPMTFLTNSSGGSLTGSIIGSREIRQDNG--LPSLQSTTASVVSSS 707 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rst | NP_001284835.1 | IG_like | 34..130 | CDD:214653 | 27/132 (20%) |
Ig | 42..114 | CDD:299845 | 20/104 (19%) | ||
C2-set_2 | 135..225 | CDD:285423 | 18/96 (19%) | ||
Ig_3 | 265..329 | CDD:290638 | 13/83 (16%) | ||
I-set | 346..420 | CDD:254352 | 19/78 (24%) | ||
Ig | 360..425 | CDD:299845 | 14/69 (20%) | ||
Ig5_KIRREL3-like | 428..524 | CDD:143235 | 20/120 (17%) | ||
IG_like | 435..524 | CDD:214653 | 16/104 (15%) | ||
itgb4 | XP_005166847.1 | Integrin_beta | 37..457 | CDD:278776 | |
EGF_2 | <468..490 | CDD:285248 | |||
EGF_2 | 545..573 | CDD:285248 | |||
Integrin_B_tail | 625..709 | CDD:285239 | |||
Calx-beta | 991..1064 | CDD:295344 | |||
FN3 | 1242..1326 | CDD:238020 | 15/90 (17%) | ||
FN3 | 1331..1420 | CDD:238020 | 27/122 (22%) | ||
fn3 | 1640..1720 | CDD:278470 | 20/91 (22%) | ||
fn3 | 1751..1835 | CDD:278470 | 18/133 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |