DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rst and Sdk1

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_808547.3 Gene:Sdk1 / 330222 MGIID:2444413 Length:2193 Species:Mus musculus


Alignment Length:842 Identity:168/842 - (19%)
Similarity:266/842 - (31%) Gaps:254/842 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PYTSYQNQRFAMEPQDQ-TAVVGARVTLPCRVIN-KQGTLQWTKDDFGLGTSRDLSGFERYAMVG 83
            ||       |..||:.: ...|...:.:|||.:. ...||||.||...|...::    .||.::.
Mouse   368 PY-------FTAEPESRILGEVEETMDIPCRAMGVPLPTLQWYKDAVPLSKLQN----PRYKVLP 421

  Fly    84 SDEEGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTFAGLTVLVPPEAPKITQGDVIYATED 148
            |.     .|.|..:..:|...:||..|  .||......|:..:|.:    ||..||..|.....|
Mouse   422 SG-----GLHIQKLSPEDSGIFQCFAS--NEGGEVQTHTYLDVTNI----APAFTQRPVDTTVTD 475

  Fly   149 RKVEIECVSVGGKPAAEITWIDGLGNVLTDNIEYTVIPLPDQRRF--TAKSVLRLTPKKEHHNTN 211
            ....:....|.|.|...|||..|...:.:.::.   ||     ||  .....||:.|.......|
Mouse   476 GMTAVLRCEVSGAPKPAITWKRGNHILASGSVR---IP-----RFMLLESGGLRIAPVFIQDAGN 532

  Fly   212 FSCQAQNTADRTYRSAKI----RVEVKYAPKVKVNVMGSLPGGAGGSVGGAGGGSVHMSTGSRIV 272
            ::|.|.||......||.:    |..:.:.|:.:|                             ::
Mouse   533 YTCYAANTEASVNASAMLTVWNRTSIVHPPEDRV-----------------------------VI 568

  Fly   273 EHSQVRLECRADANP-SDVRYRWFINDEPIIGGQKTEMVIRN-----VTRKFHDAI--VKCEVQN 329
            :.:...|.|.|..:| :.:||.|..::..|.....:.:|:..     :::.:...|  ..||:.:
Mouse   569 KGTTATLCCGATHDPRTSLRYVWKKDNVVITASSSSRIVVEKDGSLVISQTWSGDIGDYTCEIIS 633

  Fly   330 SVGKSEDSETLDISYAPSFRQRPQSMEADV-------------------GSVVSLTCEVDSNPQP 375
            ..|....:..|::...|   ..||::.|.:                   ..|:....:|..|..|
Mouse   634 EGGSDSRTARLEVIELP---HPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQVSENNSP 695

  Fly   376 EIVWIQHPSDRVVGTS-TNLTFSVSNETAGRYY----CKANVPGYAEISAD-AYVYLKGSP---- 430
               |..|.|:  ||.. |.:|  ||..|..|.|    |..|..|..:.|.: :.:.|...|    
Mouse   696 ---WKVHLSN--VGPEMTGVT--VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAP 753

  Fly   431 ---AIGSQRTQYGLV------GDTARIECFASSVPRAR-------HVSWTFNGQEISSESGHDYS 479
               .:.|.||...::      .:|.........:.|.|       |.....:..|:      :|.
Mouse   754 PKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNISSPEV------NYC 812

  Fly   480 ILVDAVPGGVKSTLIIRDSQAYHYGKYNCTVVNDYGNDVAE-------------IQLQAKKSVSL 531
            ::.|         |||..........||...:..:...|.|             :|.:|..|.::
Mouse   813 LVTD---------LIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTV 868

  Fly   532 -------LMTIVGGISVVAFLLVL------TILVVVYIKCKKRTKLPPADVISEHQITK------ 577
                   ....:.||:....||..      |:.||        |..|....|....||.      
Mouse   869 HFLWNPPPQQFINGINQGYKLLAWPADAPETVTVV--------TIAPDFHGIHHGYITNLKKFTA 925

  Fly   578 -NGGVSCKLEPGDRTSNYSDLKVDISGGYVPYGDYSTHYSPP--------PQYLTTCSTKSNGSS 633
             ...|.|...|||...:...|             ..||...|        .:.|.| |.|.:...
Mouse   926 YFTSVLCFTTPGDGPPSSPQL-------------VWTHEDKPGAVGHLSFTEILDT-SLKVSWQE 976

  Fly   634 TIMQNN------------HQNQLQLQQQQQQSHHQHHTQ------TTTLPMTFLTNSSGGSLTGS 680
            .:.:|.            .:|..:|......:.|::..|      |.|:.:..||.:..|..|.|
Mouse   977 PLERNGIIMGYQISWEVYGRNDSRLTHTLNSTMHEYKIQGLSSLTTYTIDVAALTAAGVGVTTSS 1041

  Fly   681 IIGSREIRQDNGL-PSLQSTTASVVSSSPNGSCSNQSTTAATTTTTHVVVPSSMALSVDPRY 741
            .|.|       |: |.|....:::|.|:                    :.|.|..|...|.|
Mouse  1042 TISS-------GVPPDLPGAPSNLVISN--------------------ISPRSATLQFRPGY 1076

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 25/97 (26%)
Ig 42..114 CDD:299845 19/72 (26%)
C2-set_2 135..225 CDD:285423 24/91 (26%)
Ig_3 265..329 CDD:290638 12/71 (17%)
I-set 346..420 CDD:254352 23/97 (24%)
Ig 360..425 CDD:299845 20/70 (29%)
Ig5_KIRREL3-like 428..524 CDD:143235 19/128 (15%)
IG_like 435..524 CDD:214653 17/114 (15%)
Sdk1NP_808547.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56
Ig_2 94..169 CDD:290606
IG_like 100..169 CDD:214653
IG_like 183..263 CDD:214653
Ig 197..247 CDD:299845
IG_like 281..357 CDD:214653
IGc2 294..347 CDD:197706
I-set 368..457 CDD:254352 28/106 (26%)
Ig 388..454 CDD:143165 21/76 (28%)
I-set 462..552 CDD:254352 26/97 (27%)
Ig 476..552 CDD:299845 21/83 (25%)
I-set 557..646 CDD:254352 16/117 (14%)
Ig 562..646 CDD:299845 16/112 (14%)
FN3 650..741 CDD:238020 24/100 (24%)
fn3 753..839 CDD:278470 15/100 (15%)
FN3 854..949 CDD:238020 21/115 (18%)
FN3 954..1036 CDD:238020 14/82 (17%)
FN3 1052..1148 CDD:238020 7/45 (16%)
FN3 1158..1253 CDD:238020
FN3 1261..1349 CDD:238020
FN3 1360..1453 CDD:238020
FN3 1459..1554 CDD:238020
FN3 1562..1676 CDD:238020
FN3 1686..1779 CDD:238020
FN3 1784..1865 CDD:238020
FN3 1885..1978 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2057..2080
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q6V4S5 2187..2193
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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