DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rst and Igsf9b

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_011240777.1 Gene:Igsf9b / 235086 MGIID:2685354 Length:1443 Species:Mus musculus


Alignment Length:780 Identity:154/780 - (19%)
Similarity:247/780 - (31%) Gaps:219/780 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EPQDQTAVVGARVTLPCRVIN------KQGTLQWTKDDFGLGTSRDLSGFERYAMVGSDEEGDY- 90
            ||:..||..|..|.|.|.||:      ....::|.|  ||:    .:..|.::.......:.:| 
Mouse    31 EPEFVTARAGEGVVLRCDVIHPVTGQPPPYVVEWFK--FGV----PIPIFIKFGYYPPHVDPEYA 89

  Fly    91 ---------SLDIYPVMLDDDARYQCQVSPGPEGQPAIRS-TFAGLTVLVPPEAPKITQGDVIYA 145
                     ||.:..|..:|...|:|:|....:......: ::..||:..||...: |....|.|
Mouse    90 GRASLHDKASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNGSWVHLTINAPPTFTE-TPPQYIEA 153

  Fly   146 TEDRKVEIECVSVGGKPAAEITWIDGLGNVLTDNIEYTVIPLPDQRRFTAKSVLRLTPKKEHHNT 210
            .|...:.:.|.:. |.|...:||:.. |.:|..:.:|.|          :...|.:|........
Mouse   154 KEGGSITMTCTAF-GNPKPIVTWLKE-GTLLGASAKYQV----------SDGSLTVTSVSREDRG 206

  Fly   211 NFSCQAQNTADRTYRSAKIRVE-----VKYAPKVKVNVMGSLPGGAGGSVGGAGGGSVHMSTGSR 270
            .::|:|.:.......:..:.|:     |.....:.||:                           
Mouse   207 AYTCRAYSIQGEAVHTTHLLVQGPPFIVSPPENITVNI--------------------------- 244

  Fly   271 IVEHSQVRLECRADANPSDVRYRWFINDEPIIGGQKTEMVIRNVTR--------KFHDA-IVKCE 326
               .....|.|||:|.|.::.|.|:..||.:......::.:|.:..        |..|| ...|.
Mouse   245 ---SQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCV 306

  Fly   327 VQNSVGKSED-SETLDISYAPSFRQRPQSMEADVGSVVSLTCEVDSNPQPEIV-WIQHPSDRVVG 389
            ..||:|:|.. |..|.:.|.......|..:...||....:.|.||:.|...:| |  :...|.:.
Mouse   307 PSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKW--NKDGRPLQ 369

  Fly   390 TSTNLTFSV-----------SNETAGRYYC-KANVPGYAEISADAYVYLKGSPAI----GSQRTQ 438
            ...||.:::           :.|..|.|.| ..|..|....||.|.:.||..|..    |.:..|
Mouse   370 VEKNLGWTLMEDGSIRIEEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQ 434

  Fly   439 YGLVGDTARIECFASSVPRARHVSWTFNGQEISSESGHDYSILVDAVPGGVKSTLIIRDSQAYHY 503
            .  .|....|.|.|:..| ...::|...|:  .|.|.|      :|:|.|   :|..|......:
Mouse   435 E--AGRELLIPCAAAGDP-FPVITWRKVGK--PSRSKH------NALPSG---SLQFRALSKEDH 485

  Fly   504 GKYNCTVVNDYGNDVAEIQLQAKKSVSLLMTIVGGISVVAFLLVLTILVVVYIKCKKRTKLPPAD 568
            |::.|...|                            ||..:...|.|.|:      .|......
Mouse   486 GEWECVATN----------------------------VVTSITASTHLTVI------GTSPHAPG 516

  Fly   569 VISEHQITKNGGVSCKLEPGDRTSNYSDLKVDISGGYVPYGDYSTHYSPPPQYLTTCSTKSNGSS 633
            .:..|.......||  .|||            ..|||..  .:|..|.|                
Mouse   517 SVRVHVSMTTANVS--WEPG------------YDGGYEQ--TFSVWYGP---------------- 549

  Fly   634 TIMQNNHQNQLQLQQQQQQSHHQHHTQTTTLPMTFLTNSSGGSLTGSIIGSREIRQDNGLPSLQS 698
                        |.::.|...|...:.:.....::|.                      :.||:.
Mouse   550 ------------LMKRAQFGPHDWLSLSVPPGPSWLL----------------------VDSLEP 580

  Fly   699 TTA---SVVSSSPNGSCSNQSTTAATTTTTHVVVPSSMALSVDPRYSAIYGNPYLRSSNSSLLPP 760
            .||   ||::.:..|:.:........|....|..|..:.|...||  .:..|...:....|.|||
Mouse   581 ETAYQFSVLAQNRLGTSAFSEVVTVNTLAFPVTTPEPLVLVTPPR--CLTANRTQQGVLLSWLPP 643

  Fly   761  760
            Mouse   644  643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 24/112 (21%)
Ig 42..114 CDD:299845 19/87 (22%)
C2-set_2 135..225 CDD:285423 17/89 (19%)
Ig_3 265..329 CDD:290638 15/72 (21%)
I-set 346..420 CDD:254352 18/86 (21%)
Ig 360..425 CDD:299845 19/77 (25%)
Ig5_KIRREL3-like 428..524 CDD:143235 21/99 (21%)
IG_like 435..524 CDD:214653 19/88 (22%)
Igsf9bXP_011240777.1 Ig 43..117 CDD:319273 17/79 (22%)
I-set 141..227 CDD:369462 18/98 (18%)
Ig 231..323 CDD:386229 24/121 (20%)
Ig <355..416 CDD:386229 14/62 (23%)
Ig 440..504 CDD:319273 19/103 (18%)
FN3 512..607 CDD:238020 23/160 (14%)
FN3 623..705 CDD:238020 7/23 (30%)
PHA03247 <900..1248 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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