DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rst and Iglon5

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001157990.1 Gene:Iglon5 / 210094 MGIID:2686277 Length:336 Species:Mus musculus


Alignment Length:398 Identity:83/398 - (20%)
Similarity:136/398 - (34%) Gaps:115/398 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MQLLLLATIVGMVRSSPYTSYQNQRFAMEPQDQTAVVGARVTLPCRV---------INKQGTL-- 58
            ::||..|.:.|:...|.....|:..|:....:.|...|...||.|.:         :|:...|  
Mouse    10 LRLLAAAALAGLAVISRGLLSQSLEFSSPADNYTVCEGDNATLSCFIDEHVTRVAWLNRSNILYA 74

  Fly    59 ---QWTKDDFGLGTSRDLSGFERYAMVGSDEEGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIR 120
               :||.|.            ....::.:.||  :|:.|..|.|.|:..|.|...  ...||...
Mouse    75 GNDRWTSDP------------RVRLLINTPEE--FSILITQVGLGDEGLYTCSFQ--TRHQPYTT 123

  Fly   121 STFAGLTVLVPPEAPKITQGDVIYATEDRKVEIECVSVGGKPAAEITWIDGLGNVLTDNIEYTVI 185
            ..:  |.|.||.....|:  ..:...|...|.:.|::| |:|...:||     ..|.|.      
Mouse   124 QVY--LIVHVPARIVNIS--SPVAVNEGGNVNLLCLAV-GRPEPTVTW-----RQLRDG------ 172

  Fly   186 PLPDQRRFTAK-SVLRLTPKKEHHNTNFSCQAQNTADRTYRSAKIRVEVKYAPKVKVNVMGSLPG 249
                   ||:: .:|.::..:......:.|...|..:....|.::.|.|.|.|.: .:|      
Mouse   173 -------FTSEGEILEISDIQRGQAGEYECVTHNGVNSAPDSRRVLVTVNYPPTI-TDV------ 223

  Fly   250 GAGGSVGGAGGGSVHMSTGSRIVEHSQVRLECRADA-NPSDVRYRWFINDEPIIGGQ------KT 307
                             |.:|........|.|.|.| .|:|  ::|:.:|..:..|.      :|
Mouse   224 -----------------TSARTALGRAALLRCEAMAVPPAD--FQWYKDDRLLSSGSAEGLKVQT 269

  Fly   308 E-----MVIRNVTRKFHDAIVKCEVQNSVGKSEDSETLDISYAPSFRQRPQSMEADVGSVVSLTC 367
            |     ::..||:.: |.....|...|.:|.|..|..|         .||.|:|           
Mouse   270 ERTRSMLLFANVSAR-HYGNYTCRAANRLGASSASMRL---------LRPGSLE----------- 313

  Fly   368 EVDSNPQP 375
              :|.|:|
Mouse   314 --NSAPRP 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653 23/109 (21%)
Ig 42..114 CDD:299845 18/85 (21%)
C2-set_2 135..225 CDD:285423 16/90 (18%)
Ig_3 265..329 CDD:290638 17/75 (23%)
I-set 346..420 CDD:254352 7/30 (23%)
Ig 360..425 CDD:299845 3/16 (19%)
Ig5_KIRREL3-like 428..524 CDD:143235
IG_like 435..524 CDD:214653
Iglon5NP_001157990.1 Ig 41..129 CDD:416386 22/105 (21%)
Ig strand A' 41..46 CDD:409353 1/4 (25%)
Ig strand B 48..56 CDD:409353 3/7 (43%)
CDR1 56..60 CDD:409353 0/3 (0%)
FR2 61..68 CDD:409353 0/6 (0%)
Ig strand C 61..67 CDD:409353 0/5 (0%)
CDR2 69..79 CDD:409353 1/9 (11%)
Ig strand C' 71..74 CDD:409353 1/2 (50%)
Ig strand C' 76..79 CDD:409353 0/2 (0%)
FR3 80..115 CDD:409353 11/48 (23%)
Ig strand D 84..91 CDD:409353 0/6 (0%)
Ig strand E 94..100 CDD:409353 2/7 (29%)
Ig strand F 107..115 CDD:409353 2/7 (29%)
CDR3 116..120 CDD:409353 0/3 (0%)
Ig strand G 120..129 CDD:409353 2/10 (20%)
FR4 122..129 CDD:409353 1/8 (13%)
Ig strand A 132..137 CDD:409353 1/4 (25%)
Ig_3 134..199 CDD:404760 15/85 (18%)
Ig strand A' 140..145 CDD:409353 0/4 (0%)
Ig strand B 148..157 CDD:409353 2/8 (25%)
Ig strand C 163..167 CDD:409353 2/8 (25%)
Ig strand D 174..177 CDD:409353 1/2 (50%)
Ig strand E 178..183 CDD:409353 1/4 (25%)
Ig strand F 191..199 CDD:409353 1/7 (14%)
Ig_3 217..295 CDD:404760 19/104 (18%)
putative Ig strand A 218..224 CDD:409353 2/29 (7%)
Ig strand B 234..238 CDD:409353 1/3 (33%)
Ig strand C 247..251 CDD:409353 1/5 (20%)
Ig strand E 274..278 CDD:409353 0/3 (0%)
Ig strand F 288..293 CDD:409353 1/4 (25%)
Ig strand G 301..304 CDD:409353 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.