DRSC/TRiP Functional Genomics Resources

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Protein Alignment rst and zig-8

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_499714.1 Gene:zig-8 / 176732 WormBaseID:WBGene00006985 Length:268 Species:Caenorhabditis elegans


Alignment Length:246 Identity:58/246 - (23%)
Similarity:91/246 - (36%) Gaps:57/246 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 RQRPQSMEADVGSVVS-----LTCEVDSNPQPEIVWIQHPSDRVVGTSTNLTFS------VSNET 402
            |.|.::....:.:||:     |.|.|..:.:.||.|.: .||..:.|:.|.||:      ||.::
 Worm    34 RSRVENPSQTIVNVVAENPAYLHCSVPPDAEHEIAWTR-VSDGALLTAGNRTFTRDPRWQVSKKS 97

  Fly   403 A---------------GRYYCKANVPGYAEISADAY-----VYLK------GSPAI---GSQRTQ 438
            |               |.|.|:.|         |.:     ||||      .||:.   .|.:..
 Worm    98 ANIWVLNLRRAEQQDSGCYLCEIN---------DKHNTVYAVYLKVLEPPLPSPSSLQKKSTKLM 153

  Fly   439 YGLVGDTARIECFASSVPRARH---VSWTFNGQEISSESGHDYSILVDAVPGGVKSTLIIRDSQA 500
            ..:.||...:.|..:|..:...   |.||.:|..|:......|.:.|....|.|..|:.||.:..
 Worm   154 ANMSGDEVVLNCTVTSTDKDEEVLDVVWTRDGNTINFNDTEKYILKVKRDAGVVIETMRIRKATM 218

  Fly   501 YHYGKYNCTVVNDYGNDVAEI---QLQAKKSVSLLMTIVGGISVVAFLLVL 548
            ...|.|.|.......:.:..|   :.|...|.:...:|. .||:..:.|.|
 Worm   219 EDDGNYACEHSQQKASQIVHINKAEAQTSNSATFPCSIF-SISIFMYFLYL 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653
Ig 42..114 CDD:299845
C2-set_2 135..225 CDD:285423
Ig_3 265..329 CDD:290638
I-set 346..420 CDD:254352 23/96 (24%)
Ig 360..425 CDD:299845 22/95 (23%)
Ig5_KIRREL3-like 428..524 CDD:143235 23/104 (22%)
IG_like 435..524 CDD:214653 20/94 (21%)
zig-8NP_499714.1 IG_like 55..134 CDD:214653 23/88 (26%)
Ig 55..129 CDD:143165 20/83 (24%)
ig 158..229 CDD:278476 19/70 (27%)
IG_like 158..227 CDD:214653 18/68 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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