Sequence 1: | NP_001284835.1 | Gene: | rst / 31290 | FlyBaseID: | FBgn0003285 | Length: | 764 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038943864.1 | Gene: | Dscam / 171119 | RGDID: | 619992 | Length: | 2034 | Species: | Rattus norvegicus |
Alignment Length: | 821 | Identity: | 184/821 - (22%) |
---|---|---|---|
Similarity: | 291/821 - (35%) | Gaps: | 181/821 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 SPYTSYQNQRFAMEPQDQTAVVGARV-----------TLPCRVIN-KQGTLQWTKDDFGLGTSR- 71
Fly 72 --DLSGFERYAMVGSDEEGDYSLDIYPV------MLDDDARYQCQVSPGPEGQPAIRSTFAGL-T 127
Fly 128 VLVPP-----EAPKITQGDVIYATEDRKVEIECVSVGGKPA--AEITWIDGLGNVLTDNIEYTVI 185
Fly 186 PLPDQRRFTAKSVLRLTPK---KEHHNTNFSCQAQN--TAD-RTYRSAKIRVEVKYAPKVKVNVM 244
Fly 245 GSLPGGAGGSVGGAGGGSVHMSTGSRIVEHSQVRLECRADANPSDVRYRWFINDEPI-IGG--QK 306
Fly 307 --TEMVIRNVTRKFHDAIVKCEVQNSVGKSEDSETLDISYAPSFRQRPQSMEADVGSVVSLTCEV 369
Fly 370 DSNPQPEIVW-----IQHPSDRVVGTSTN-----LTFSVSNETAGRYYCKANVPGYAEISADAYV 424
Fly 425 YL---KGSPAIGSQRTQYGL-VGDTARIECFASSVPRARHVSWTFNGQEISSESGHDYSILVDAV 485
Fly 486 PGGVKSTLIIRDSQAYHYGKYNCTVVNDYGNDVAEIQLQAKKSVSLL----MTIVGGISVVAFLL 546
Fly 547 VLTILVVVYIKCK------------KRTKLPPADVISEHQIT-KNGGVSCKLEPGDRTSNYSDLK 598
Fly 599 VDISGGYVPYGDYSTHYSPPPQYLTTCSTKSNGSSTIMQNNHQNQLQLQQQQ--QQSHHQHHTQT 661
Fly 662 TTLPMTFLTNSSGGSLTGSIIGSREIRQDNGLPSLQSTTASVVSSSPNG--SCSNQSTTAATTTT 724
Fly 725 THVVVPSSMALSVDPR-YSAIYGNPYLRSSNSSLLPPPTAV 764 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rst | NP_001284835.1 | IG_like | 34..130 | CDD:214653 | 26/117 (22%) |
Ig | 42..114 | CDD:299845 | 18/92 (20%) | ||
C2-set_2 | 135..225 | CDD:285423 | 18/97 (19%) | ||
Ig_3 | 265..329 | CDD:290638 | 19/68 (28%) | ||
I-set | 346..420 | CDD:254352 | 21/83 (25%) | ||
Ig | 360..425 | CDD:299845 | 22/74 (30%) | ||
Ig5_KIRREL3-like | 428..524 | CDD:143235 | 27/96 (28%) | ||
IG_like | 435..524 | CDD:214653 | 23/89 (26%) | ||
Dscam | XP_038943864.1 | Ig | 26..121 | CDD:416386 | 24/109 (22%) |
Ig strand A' | 33..37 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 40..49 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 55..61 | CDD:409353 | 3/10 (30%) | ||
Ig strand C' | 63..66 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 72..75 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 80..85 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 98..106 | CDD:409353 | 2/8 (25%) | ||
Ig strand G | 109..121 | CDD:409353 | 4/13 (31%) | ||
Ig | 125..210 | CDD:416386 | 20/104 (19%) | ||
Ig strand A | 126..130 | CDD:409353 | 0/3 (0%) | ||
Ig strand A' | 132..136 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 139..149 | CDD:409353 | 2/17 (12%) | ||
Ig strand C | 157..163 | CDD:409353 | 2/17 (12%) | ||
Ig strand C' | 164..167 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 179..185 | CDD:409353 | 1/5 (20%) | ||
Ig strand F | 191..201 | CDD:409353 | 2/9 (22%) | ||
IGc2 | 239..300 | CDD:197706 | 20/62 (32%) | ||
Ig strand B | 242..246 | CDD:409353 | 2/3 (67%) | ||
Ig strand C | 255..259 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 290..295 | CDD:409353 | 1/4 (25%) | ||
Ig | 313..395 | CDD:416386 | 22/85 (26%) | ||
Ig strand A | 314..319 | CDD:409353 | 0/4 (0%) | ||
Ig strand A' | 322..326 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 329..339 | CDD:409353 | 6/9 (67%) | ||
Ig strand C | 344..350 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 351..354 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 368..374 | CDD:409353 | 0/5 (0%) | ||
Ig strand F | 381..389 | CDD:409353 | 3/7 (43%) | ||
Ig | 406..501 | CDD:416386 | 26/96 (27%) | ||
Ig strand A | 406..409 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 415..419 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 422..431 | CDD:409353 | 1/8 (13%) | ||
Ig strand C | 436..442 | CDD:409353 | 2/6 (33%) | ||
Ig strand C' | 444..447 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 452..460 | CDD:409353 | 3/7 (43%) | ||
Ig strand E | 464..473 | CDD:409353 | 4/8 (50%) | ||
Ig strand F | 480..488 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 491..501 | CDD:409353 | 1/9 (11%) | ||
Ig | 504..593 | CDD:416386 | 22/123 (18%) | ||
Ig strand A | 505..507 | CDD:409353 | 0/1 (0%) | ||
Ig strand A' | 512..516 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 519..526 | CDD:409353 | 2/19 (11%) | ||
Ig strand C | 533..539 | CDD:409353 | 0/5 (0%) | ||
Ig strand C' | 540..542 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 549..553 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 557..563 | CDD:409353 | 2/15 (13%) | ||
Ig strand F | 571..579 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 583..593 | CDD:409353 | 2/9 (22%) | ||
Ig | 596..686 | CDD:416386 | 16/94 (17%) | ||
Ig strand A | 597..599 | CDD:409353 | 0/1 (0%) | ||
Ig strand B | 611..620 | CDD:409353 | 1/8 (13%) | ||
Ig strand C | 625..632 | CDD:409353 | 2/6 (33%) | ||
Ig strand C' | 634..636 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 643..648 | CDD:409353 | 2/5 (40%) | ||
Ig strand E | 651..658 | CDD:409353 | 1/6 (17%) | ||
Ig strand F | 665..673 | CDD:409353 | 2/7 (29%) | ||
Ig strand G | 676..685 | CDD:409353 | 2/8 (25%) | ||
Ig_DSCAM | 689..784 | CDD:409397 | 10/34 (29%) | ||
Ig strand B | 707..711 | CDD:409397 | 0/3 (0%) | ||
Ig strand C | 720..724 | CDD:409397 | 2/3 (67%) | ||
Ig strand E | 749..753 | CDD:409397 | |||
Ig strand F | 763..768 | CDD:409397 | |||
Ig strand G | 777..780 | CDD:409397 | |||
Ig_DSCAM | 785..884 | CDD:409398 | |||
Ig strand B | 805..809 | CDD:409398 | |||
Ig strand C | 818..822 | CDD:409398 | |||
Ig strand E | 848..852 | CDD:409398 | |||
Ig strand F | 862..867 | CDD:409398 | |||
Ig strand G | 875..878 | CDD:409398 | |||
FN3 | 885..978 | CDD:238020 | |||
FN3 | 986..1083 | CDD:238020 | |||
FN3 | 1091..1184 | CDD:238020 | |||
FN3 | 1189..1278 | CDD:238020 | |||
Ig_3 | 1287..1363 | CDD:404760 | |||
Ig strand B | 1303..1307 | CDD:409353 | |||
Ig strand C | 1316..1320 | CDD:409353 | |||
Ig strand E | 1342..1346 | CDD:409353 | |||
Ig strand F | 1356..1361 | CDD:409353 | |||
FN3 | 1380..1470 | CDD:238020 | |||
FN3 | 1486..1555 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |