DRSC/TRiP Functional Genomics Resources

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Protein Alignment rst and igsf9b

DIOPT Version :9

Sequence 1:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_031761656.1 Gene:igsf9b / 100379858 XenbaseID:XB-GENE-5887265 Length:1392 Species:Xenopus tropicalis


Alignment Length:443 Identity:106/443 - (23%)
Similarity:168/443 - (37%) Gaps:92/443 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 VNVMGSLPGGAGGS------VGGAGGGSVHMSTGSRIVEHSQVRLECRADANPSDVRYRWFINDE 299
            ::.:|....|||||      |....|.||.:  |..:|....|:        |......||....
 Frog    13 ISTLGLSVQGAGGSREEPQFVTARAGESVIL--GCDVVHPLTVQ--------PPPYVVEWFKFGV 67

  Fly   300 PI-----------------IGG----QKTEMVIRNVTRK----FHDAIVKCEVQNSVGKSEDSET 339
            ||                 :|.    .|..:.|..|..:    :...::..|.|.....:.....
 Frog    68 PIPIFIKFGFYPPHVDPEYVGRAALYDKASLRIEQVRSQDQGWYECKVLMLEHQYDTFHNGSWVH 132

  Fly   340 LDISYAPSFRQR-PQSMEADVGSVVSLTCEVDSNPQPEIVWIQHPSDRVVGTST-------NLTF 396
            |.::..|:|.:. ||.:|...||.::|||....||:|.:.|::  ....:|.::       :||.
 Frog   133 LTVNAPPTFTETPPQYLEVKEGSSITLTCTAFGNPKPTVSWLR--EGEFLGRTSKYQLSDGSLTI 195

  Fly   397 -SVSNETAGRYYCKA-NVPGYAEISADAYVYLKGSPAIGSQRTQYGL-VGDTARIECFASSVPRA 458
             |:..|..|.|.|:| ::.|.|..|....|  :|||.|.|......: :...|...|.|.:.|  
 Frog   196 SSIGREDRGSYMCRATSIQGEAVHSTRLLV--QGSPFIVSPPENITVNISQDALFTCQAEAYP-- 256

  Fly   459 RHVSWTFNGQEISSESGHDYSILVDAVPGGVKSTLIIRDSQAYHYGKYNCTVVNDYGNDVAEIQL 523
            .::::|:..||.:....:|..:.|..:   :..||||...:....|||.|...|..|.       
 Frog   257 GNLTYTWYWQEENVFFKNDLKLRVRIL---IDGTLIIFRVKPEDAGKYTCVPSNSLGR------- 311

  Fly   524 QAKKSVSLLMTIVGGISVVAFLLVLTILVVV--YIKCKKRTKLPPADVISEH------QITKNGG 580
              ..|.|..:|:.....||....|:.:.|.:  :|:|.... :||...:..:      :|.|..|
 Frog   312 --SPSASAYLTVQYPARVVNMPPVIYVPVGIHGHIRCPVEA-VPPVTFVKWNKDGRPLRIDKFSG 373

  Fly   581 VSCKLEPGDRTSNYSDLKVDISGGY--VPYGDYST-HYSPP-------PQYLT 623
              .|| ..|.|.:..:...::.|.|  |||....| ..|||       |.|.|
 Frog   374 --WKL-LDDGTIHVEEATEELLGTYTCVPYNALGTMGQSPPARLLLKDPPYFT 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_001284835.1 IG_like 34..130 CDD:214653
Ig 42..114 CDD:299845
C2-set_2 135..225 CDD:285423
Ig_3 265..329 CDD:290638 13/88 (15%)
I-set 346..420 CDD:254352 25/83 (30%)
Ig 360..425 CDD:299845 21/73 (29%)
Ig5_KIRREL3-like 428..524 CDD:143235 24/96 (25%)
IG_like 435..524 CDD:214653 19/89 (21%)
igsf9bXP_031761656.1 IG 30..115 CDD:214652 16/94 (17%)
I-set 139..225 CDD:400151 26/87 (30%)
Ig strand A 139..142 CDD:409353 1/2 (50%)
Ig strand A' 148..151 CDD:409353 0/2 (0%)
Ig strand B 157..164 CDD:409353 3/6 (50%)
Ig strand C 170..175 CDD:409353 1/4 (25%)
Ig strand D 185..189 CDD:409353 0/3 (0%)
Ig strand E 191..195 CDD:409353 1/3 (33%)
Ig strand F 204..212 CDD:409353 4/7 (57%)
Ig strand G 215..225 CDD:409353 3/9 (33%)
I-set 229..321 CDD:400151 24/105 (23%)
Ig strand B 246..250 CDD:409353 1/3 (33%)
Ig strand C 260..264 CDD:409353 1/3 (33%)
Ig strand E 286..290 CDD:409353 2/3 (67%)
Ig strand F 300..305 CDD:409353 3/4 (75%)
Ig strand G 314..317 CDD:409353 1/2 (50%)
Ig 344..405 CDD:409353 16/64 (25%)
Ig strand C 355..360 CDD:409353 0/4 (0%)
Ig strand E 380..384 CDD:409353 1/3 (33%)
Ig strand F 394..399 CDD:409353 1/4 (25%)
Ig 429..505 CDD:416386
Ig strand A' 429..432 CDD:409353
Ig strand B 438..445 CDD:409353
Ig strand C 451..456 CDD:409353
Ig strand C' 458..460 CDD:409353
Ig strand E 471..476 CDD:409353
Ig strand F 484..492 CDD:409353
Ig strand G 495..505 CDD:409353
FN3 510..605 CDD:238020
FN3 622..703 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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