DRSC/TRiP Functional Genomics Resources

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Protein Alignment rst and kirrel1b

DIOPT Version :10

Sequence 1:NP_525058.2 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_017212964.1 Gene:kirrel1b / 100170816 ZFINID:ZDB-GENE-070912-173 Length:801 Species:Danio rerio


Alignment Length:771 Identity:197/771 - (25%)
Similarity:311/771 - (40%) Gaps:128/771 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IVGMVRSSPYTSYQNQRFAMEPQDQTAVVGARVTLPCRVINKQGTLQWTKDDFGLGTSRDLSGFE 77
            ||.:...|.:..:...||:.||.||:.|:|.||.|.|.|.|..|.:|||||...||...||..:.
Zfish    10 IVTLAIISVHRVFSGPRFSQEPADQSVVIGERVVLSCVVFNYTGIVQWTKDGLALGIGEDLRAWP 74

  Fly    78 RYAMVGSDEEGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTFAGLTVLVPPEAPKITQGDV 142
            ||.::...:.|.|:|:|....|.||:.|:||.:     :.|:||..|.||||:||:.|.|.....
Zfish    75 RYRVLRIMDVGQYNLEITSADLTDDSLYECQAT-----EAALRSRRAKLTVLIPPDGPVIEGSPE 134

  Fly   143 IYATEDRKVEIECVSVGGKPAAEITWI-DGLGNVLTDNIEYTVIPLPDQRRFTAKSVLRLTPKKE 206
            |..|......:.|||.|.||.:.|.|. ||   ::.:....:...|.|::|.|.||.|.:.|...
Zfish   135 ILLTAGTSFNLTCVSRGAKPMSTIEWYKDG---IIVEGAHTSTEVLSDRKRVTTKSFLEIQPMDT 196

  Fly   207 HHNTNFSCQAQNTADRTYRSAKIRVEVKYAPKVKVNVMGSLPGGAGGSVGGAGGGSVHMSTGSRI 271
            ....||:|.|.|.|....:.:.:.:.:.:.|.|.:::                       ....:
Zfish   197 DTGRNFTCVASNLAAPLGKRSTVTLNIHHPPTVILSI-----------------------EPRSV 238

  Fly   272 VEHSQVRLECRADANPSDVRYRWFINDEPIIGGQKTEMVIRNVTRKFHDAIVKCEVQNSVGKSED 336
            :|..:|:..|:|.|||..:.||| .....|:.|.:..:........|....|.|.|.|:||.:..
Zfish   239 LEGERVKFTCQATANPPIMGYRW-AKGGVILDGARESVFETTADHSFFTEPVSCLVFNAVGSTNV 302

  Fly   337 SETLDISYAPSFRQRPQSMEADVGSVVSLTCEVDSNPQPEIVWIQHPSDRVVGTSTNLTF-SVSN 400
            |..:|:.:.|.....|:.:..||.|.|:|.|:...||...:.|.:..|..|:..|..|.. |||.
Zfish   303 SILVDVHFGPILVVEPRPVTVDVDSDVTLNCKWSGNPPLTLTWTKKGSSMVLSNSNQLFLKSVSQ 367

  Fly   401 ETAGRYYCKANVPGYAEISADAYVYLKGSPAIGSQRTQYGLVGDTARIECFASSVPRARHVSWTF 465
            ..||:|.|||.||.......:..:.:.|.|.|.|:..||.:.|:...|:|:.:|.|....:.|.:
Zfish   368 ADAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSEPIQYAVRGEKGEIKCYIASTPPPDKIVWAW 432

  Fly   466 NGQEISSESG---HDYSILVD--AVPGG-VKSTLIIRD-SQAYHYGKYNCTVVNDYGNDVAEIQL 523
            .......|.|   ..|::...  |..|| |.|||.|.: .:|.....||||..|.:|.....|.|
Zfish   433 KENVWEKERGTLLERYTVEQSRPATQGGAVLSTLTINNVMEADFQSTYNCTAWNAFGPGTMIITL 497

  Fly   524 Q----AKKSVSLLMTIVGGISVVAFLLVLTILVVVYIKCKKRTKLPPADVISEHQITKNGGVSCK 584
            :    |.:.:..:..|.||....:.||:|.:..:::...::|.             :...||:.|
Zfish   498 EETDIASEDIVPVGVIAGGSVGSSILLLLLLFALIFYLYRQRK-------------SSRRGVTLK 549

  Fly   585 LEPGDRTSNYSDLKVDISGGYVPYGDYSTHYSPPPQYLTTCSTKSNGSSTIMQNNHQNQLQLQQQ 649
                      .|:||:                       |.:.::|                 .:
Zfish   550 ----------PDIKVE-----------------------TVNKETN-----------------LE 564

  Fly   650 QQQSHHQHHTQTTTLPMTFLTNSSGGSLTGSIIGSREIRQDNGLPSLQSTTASVVSSSPNGSCSN 714
            ::.:.....|:......:||.:.|....|.......:::||....:|:.......:..|.....|
Zfish   565 EEAASASTATRMVKAMYSFLPSVSLSPSTQPFKDDMDLKQDLQTETLEPKVEEYEAKDPTNGYYN 629

  Fly   715 QSTTAATTTTTHVVVPSSMALSVDPRY--------SAIYGNPYLRSSNSSLLPPPT 762
                  ...|||..|.||....:...:        ||..|.|      :::.|.||
Zfish   630 ------VRATTHDEVRSSTRSLLYQEFRAPNPASVSASTGGP------ANIHPAPT 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rstNP_525058.2 Ig 29..110 CDD:472250 36/80 (45%)
Ig strand B 45..49 CDD:409353 2/3 (67%)
Ig strand E 90..94 CDD:409353 2/3 (67%)
Ig strand F 104..109 CDD:409353 2/4 (50%)
C2-set_2 135..225 CDD:400489 28/90 (31%)
Ig strand B 151..155 CDD:409353 0/3 (0%)
Ig strand C 165..169 CDD:409353 1/3 (33%)
Ig strand E 197..201 CDD:409353 2/3 (67%)
Ig strand F 211..216 CDD:409353 3/4 (75%)
Ig strand G 226..229 CDD:409353 0/2 (0%)
Ig 271..340 CDD:472250 20/68 (29%)
Ig_3 346..411 CDD:464046 23/65 (35%)
Ig 428..524 CDD:472250 31/102 (30%)
Ig strand B 446..450 CDD:409353 1/3 (33%)
Ig strand C 460..464 CDD:409353 0/3 (0%)
Ig strand E 491..495 CDD:409353 3/3 (100%)
Ig strand F 505..510 CDD:409353 3/4 (75%)
Ig strand G 518..521 CDD:409353 0/2 (0%)
kirrel1bXP_017212964.1 Ig 25..120 CDD:472250 41/99 (41%)
Ig strand B 42..46 CDD:409387 2/3 (67%)
Ig strand C 55..58 CDD:409387 1/2 (50%)
Ig strand E 82..86 CDD:409387 0/3 (0%)
Ig strand F 101..106 CDD:409387 2/4 (50%)
Ig strand G 113..116 CDD:409387 1/2 (50%)
Ig 127..223 CDD:472250 28/98 (29%)
Ig strand B 143..147 CDD:409416 0/3 (0%)
Ig strand C 157..161 CDD:409416 1/3 (33%)
Ig strand E 187..191 CDD:409416 2/3 (67%)
Ig strand F 201..206 CDD:409416 3/4 (75%)
Ig strand G 216..219 CDD:409416 0/2 (0%)
Ig_3 226..>286 CDD:464046 15/83 (18%)
Ig_3 312..377 CDD:464046 22/64 (34%)
IgI_5_KIRREL3 395..498 CDD:409479 31/102 (30%)
Ig strand A 396..400 CDD:409479 1/3 (33%)
Ig strand A' 402..405 CDD:409479 0/2 (0%)
Ig strand B 413..420 CDD:409479 2/6 (33%)
Ig strand C 427..432 CDD:409479 1/4 (25%)
Ig strand C' 434..437 CDD:409479 0/2 (0%)
Ig strand D 448..455 CDD:409479 1/6 (17%)
Ig strand E 461..468 CDD:409479 4/6 (67%)
Ig strand F 479..486 CDD:409479 4/6 (67%)
Ig strand G 489..496 CDD:409479 1/6 (17%)

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